| Id Trinity | TRINITY_DN42195_c0_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_503579 |
| Sequence | CTTTATTCTAAAAAAATTAATTAGGGGCAATAACTGAGTAGGTAGAATGGAGTTTTAATTGAAGATGAATCTAGAAGGAGGTATGAAGATGAAACCGTGG GAATTTTAAGGTGGGCACGTTGAAAAAAATTATGGCATTTCTGAGGTCAGTGGCTATTGCTGCATCTGCTATTCCTGCTGCTTTGGCTCTTTCTTCTCTT TATTCCTCTTCTCGATCCCCCTATTTCCCTTCTCATCCTAATCGTTTCCCACTCCTTAAATCATTTGCTATCTCTCCCTCACCTCTCCGCATGGACCCCA ACCCCACTTCTCAGGTTTCCTATTTATTTTTAATTTTCATCCGTTTGCGAGTTCAGTTTTCGAAAGGTTCCAGAGCCATGAATTATACTTCCGAGACGCC TCTGAAGTCTTTAGTTGTATTTTTTCCCTTCCAAAACTAAACTCGCAAACAAATTACTAAATTTCTTAATTATTATGATACAGCCATAATATAAGATTCA ATTCTTATTTAATATTTATATCTTCCTTTCGCAGTATGATGCTGCTGGATTTCCAGAGTTACTGACGGAATACATGGTGGATATGAAATGTGAAGGCTGT GTTAATGCGGTTAAAGATAAGTTGCAGACAATCAAGGGAGTGAAGAATGTAGAGGTGGACTTGAGCAATCAGGTAGTTAGAGTTCTTGGTTCAACACCAG TGAAGACCATGACGGAAGCTCTGGAGCAGACTGGTAGAATAGCCCGATTAATCGGACAAGGAGTTCCAGAAGACTTCTTAATATCGGCTGCTGTTTCCGA ATTCAAAGGTCCAGATATTTTTGGCGTTGTTCGCCTGGCTCAAGTAAACATGGAACTAGCTAGGGTTGAAGCCAACTTTAGTGGGTTGTCACCAGGAAAG CATGGATGGTCTATTAATGAGTTTGGAGATCTGACTAGAGGTGCAGCAAGCACTGGTAAATTGTTCAGTCCAACAAATGAGAAAGATGCTAAGCCAGTTG GTGACCTGGGAACACTAGATGCTAACGAAAAGGGTGAGGCTTTTTATACCGGGGTCATAGAAAAACTGAGGGTGGCAGATCTTATTGGACGAGCTGCGGT AGTATATGCAACTGAAGATAAATCAGAACCCGGTATAGTTGCTGCTGTAATAGCTAGAAGTGCAGGAGTGGGTGAGAACTATAAAAGATTATGTACCTGT GATGGCACCACCATATGGGAGGCAAGTGACAGAGATTTTGTTACTAGCAAGGTCTGATAAAGTAATTCACTGAAAACAAAATAAAGGGAATAGATGCTTT CATGTGATCTTTCTTATCATGTGGCCTTTGAATGAGATATAGACACAAAGGTTTAAAAACAAGTTTACAAATCTTGACTGGATTCATTAATAAATTGTGT TATCTCTCTTCTACATCACCACATGACAGGAAAAAGCATGAGATCTATTCCCACAAAACATTGTAAGATTTAGATGCCTTGTCACCCTCCAGTACTTGAT TTCTTGAGGGATTTGTACACTATTGAAAAGGATTGCATTTATAGGCCATTTACAATACTTTGACATGTTAATCAAACATGTTTTCATAGAGACAACATCA ACAATATCCTTTTCATTCTTATTTGCTATTGCTTTCAGAGGAAAACTGCAAAAATTAGCACGCACCTAATTGAATGAAACATTGTAGCTTCTAATTAAAC TCATCCAACTTAAAAGCAAGTATATTGACACAACTGCGGCTTGTGTTTGGTGCGTAGCAGAGCTTCAGTGCCCCCAATTTGCTCTTCT BLAST |
| Tissue | pods |
| Gene name | LI_gene_134279; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_503579
| Blastp | Copper chaperone for superoxide dismutase, chloroplastic/cytosolic from Arabidopsis with 74.67% of identity |
|---|---|
| Blastx | Copper chaperone for superoxide dismutase, chloroplastic/cytosolic from Arabidopsis with 73.47% of identity |
| Eggnog | heavy metal transport detoxification protein(COG2608) |
| Kegg | Link to kegg annotations (AT1G12520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446629.1) |
| Pfam | Heavy-metal-associated domain (PF00403.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |