Ll_transcript_373690

Id TrinityTRINITY_DN42268_c0_g1_i2
Name TranscriptLl_transcript_373690
SequenceAGGATGATGCTTACGTGCTTCACTTAGCCTAGTCATAATTCATTCTTCTCCGCCTTCCTACTCAAGAAAATAATATTGAAGTTTTATTAAACGAAAAAAT ATAAAACCCTTCTAAAACCCTCCTTAAACCACTTTCCTAGTACTTACCCCCATAAGCATGTGGACCCCAACGCCGGAGACGCTAGCTTCCACTAAAACCG CCCTTTCCGTTGCCGCTTCACTCGCCGCCACCGCGGTTCTCCTCCGATCTACCGTTAACGATCTCATACCTGATACCGTCTACAACTACTTCAACTCCAA CTTTCGCAAATTCTCTAACCGACTCTCCTCTCACCTCACCATCATCATCGAAGAACACGACGGTCTCACCGCCAACCAAATGTTTGACACCGCCAATGTT TATGTGGGATCCAAACAACAATCTTCAGCGCAAAGAATCAAGGTGCATAAGCCACTCAAAGAAGAGCATTTACAAGTTAACATTGACAAGAACCAAGAGT TTTATGATTCCTACAAAGGCATAAAACTCAAATGGGTCCTCGTTTCTATGCAAAACAACAACATAAATCTTCATAACAAGCGTGATAGTCACAACAATGC TTCATTTCATCGAGTTGAAGTGCGTCACTTTGAGTTAACCTTTCACAAGAAGCATAGAGACACGGTTTTGGGTTCTTACTTGCACCACGTTCTTCACGAG GCTGAGGCAATTAGAGAGGGCAAGAAAACTTTGAAACTTCACACCATTGATTACAATGGCACTGATTATTGGAACTCGATTGTATTAAACCACCCTGCCA CATTTGATACTGTGGCCATGGAACCTGAGATGAAAGTGCAACTGTTGGAAGATCTGTGTAAGTTTCTGGATAGGAAAGAGTATTATAAGAGAGTTGGGAA GTCTTGGAAACGAGGTTACCTTTTGTATGGCCCCCCAGGTACTGGAAAATCAAGCTTGATTGCTGCAATGGCTAACCATCTCAAGTTTGACATATATGAC ATGGATTTGAGGGAGGTGCAGTGTAATTCGGATCTTAGAAGGTTGCTTATTGGGACGGGAAGCCGATCAATTTTGGTGATTGAGGACATCGATTGCTCAG TAAAATTGCACAACCGGGAAGTAAATAATAATGGTGAAGATGAAGATAAGGTAACTCACCCATATATATAAATTAATTATTCACATTGTATCAATTTTTA TTGAGTAAATGTATATTCACTAATATATTAATGATCAGTCAATATTCTATCAGCTTAGTGCACTCAAAATGGATGCACATAGTTTATATACAAGATTGTG GTACCATTGATGCAATGTAACACTTTGATGTTGAGTTCACTCGAATTTGTTTGATCCTATCAAGGTTACTCTGTCAGGATTGCTAAACTTCATTGATGGA TTGTGGTCAAGCTGTGGAGATGAACGAATCATAATATTTACAACAAATTACAAGGATCGTCTTGATCCGGCATTGTTGAGACCTGGTCGCATGGATATGC ACATTCATATGTCTTATTGCTCTTTCAGTGGTTTCAAGACATTGGCGGCTAACTACCTACGAATTCAGAACCATCCCCTGTTTGAGGACATAGAGGGACT GTTGCACAAGGTTAATGCAACGCCTGCTGAAGTTGCAGGAGAGCTGATGAAAAGTGACAATACAGACAGTGCCATCAAAGGGCTCATCAGCTTCCTTCAA TGCAAGCAGCCAGGCATAACAACACCTTAAAGTAAGGTGTTTTCCTTATTTTTGAGCCAGAGGCAGCACCTTTTCAGTGTTATAGTTAGTATATTGTTTT AAGAATATTTCTTAGGAACAAGAATAGTTTATGTTGGAGATGTGATTGGATTTTAATAAGGGTTCTCTTAACTTTAACTTTAGCCTAAGAACCGAGGACA AGGTATTAAAAGTGATAAAAAGATTATTGACTTATTAAGAGAGAAATGAAAACTTTCCCCAATAGAATTCATTCATATGAACAGGGCATTAATGAGATGT TTATTAGAAATTTATAATTTCTAATTAAGGTGGGCATCATATATTTAATACAATTGTATCCGCT BLAST
Tissuepods
Gene nameLI_gene_134369; 
Additional informationdetails; 

Expression of Ll_transcript_373690

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_373690

BlastpProtein HYPER-SENSITIVITY-RELATED 4 from Arabidopsis with 48.49% of identity
BlastxProtein HYPER-SENSITIVITY-RELATED 4 from Arabidopsis with 46.56% of identity
EggnogActs as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
KeggLink to kegg annotations (AT3G50930)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019457304.1)
PfamDomain associated at C-terminal with AAA (PF14363.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;