Ll_transcript_373635

• Id Trinity: TRINITY_DN42290_c0_g1_i1
• Name Transcript: Ll_transcript_373635
• Sequence: GGAGCAGACAACACACACTTCTCCTTTCTTCTCTCATTCTTCCCCAATTCTGAACCCTAAATCATCACCTCCGATCACCACTTCCGACCACCGCCACCGC CGTCGTCGCAGATTCAGTGAGTTTCTTGTAAACTGTTTGGTGAAGCCTACGAATCGGTTGGATCAATGTATCAGTGGAGGAAGTTTGAGTTCTTTGAGGA GAAGTATGCTGCAAAATGCACTATTCCTGATGAGGAGGTGGAGAATAGTGATGGTGGTGTTGTTGCTAACAAGAACAAGAAGATTCAGTGTTGTTCAAGT GGCAGGGGAAAGGTGGTGACTGGCATCGATGATGGGACGGTTTGCTTGTTTGATCGAGGCCTCAAGTTCAATTATGCATTTCAACCTCACTCCTCTTCTG TTCACTTTCTTCAGCAGCTCAAGCAACGCAACTTTCTGGTAACCATTGGTGAAGATGAACAGCTTACTCCCCAACAATCAGCTTTGTGCTTAAAGGTTTT TGACCTTGATAAGATGCAAGCTGAGAGTTCAAGCACGGCGAGTCCTGATTGCGTTGGGATATTGCGAATATTCACTAGTCAGTTTCCTGAGGCAAAGATT ACTTCTTTTTTAGTCTTGGAAGAAGTGCCACCAATACTACTCATAGCTATTGGCTTAAATAATGGTTCTATTTACTGCATAAAAGGAGACATTGCCCGAG AGCGTATCAACCGTTTCAAGCTTCAGGTGGAAAACCATTCTGACAAAGGTCTTTCCTGTGTTACTGGTCTTGGGTTTAAGGTGGATGGTCGATCTCTACA ATTATTTGCTGTAACTCCAAGCTCAGTGAGCTTGTTCTCATTGCATGATGAGCCACCAAGAAGGCAAACACTTGATCAGATTGGATGTGGTCTAAACAGC GTTGCAATGAGTGACCGCTCTGAATTGATAATTGGTCGATCAGAAGCAGTGTATTTTTATGAAGTTGATGGTCGTGGTCCTTGTTGGGCTTTCGAGGGAG AGAAGAAATTGATAGGATGGTTTCGTGGATACCTTCTGTGTGTTATTGCAGATCAAAGAATGGGAAATCATACTTTCAACATCTATGACTTGAAGAATCG TTTAATAGCCCACAGTGTGTTGGTTAAAGACGTTTCTCACATGCTCTATGAATGGGGTAACATCATACTCATAATGGCTGACAAATCAGCTTTATGTATT GGGGAAAAGGATATGGAAAGCAAGTTAGACATGTTATTTAAGAAAAACCTATATACTGTAGCAATTAATCTTGTTCAGACTCAGCAAGCAGATGCTGCAG CTACTGCTGAAGTGCTAAGAAAATATGCTGACCATCTATATAGCAAGCAAGACTATGATGAGGCAATGGCTCAGTACATACAAACTATTGGCCACCTTGA ACCTTCTTATGTGATACAGAAGTTTTTGGATGCACAAAGAATCTACAACCTCACAAATTACTTGGAAAAGCTACATGAGAAGGGTCTTGCTTATAAAGAT CACACTACACTTCTGTTGAACTGTTACACCAAATTGAAAGATGTTGAAAAGTTAAATCTATTTATTAAAAGTGATGACAGCATCGGGGAACTTAAGTTTG ATGTGGAAACAGCACTCAGGGTTTGCCGTGCTGCCAATTACCATGAGCATGCAATGTATGTTGCAAAGAAGGCAGGGAAGCATGAGTGGTACTTGAAGAT CTTGCTCGAAGATCTTGGTAGATATGAAGAGGCCTTGGAATATATTTCAAGTCTTGAATCAAGTCAGGCAGGGATGACAATAAAGGAGTATGGTAAAATT CTAATAGAGCACAAGCCAGTTGAGACAATTGAGATTCTCATAAGGCTTTGTACAGAAGATGAAGACAGAAGAGGAGACTCAAATGTTATATATGTATCTA TGTTGCCATCTCCTGTTGATTTTCTTAGCGTTTTCATTCATCATCCTCAGTCCCTTATGGATTTTCTTGAAAAATATACCAATAAGGTCAAGGATTCGCC TGCTCAAGTGGAGATTCACAATATCCTATTAGAACTGTATATAGCCAATGAATTGAACTTTCCTTCAATGTCACAAGTTAATGAGGATGTAGAGTATGTT AATGTACCATCTGCTAAAACTCTGATTTTAAGTTCTCAGTCTAATGGAACCATTGCTGATCACAAAGGCTCACAAGAGGAAACAGACCGTCTTGAAAGGC GTAAAAAGGGTCTAAGCTTGCTTAAGAGTGCATGGCCTCCAGAGACAGAACATCCACTTTATGATGTTGATTTGGCAATTATACTGTGTGAAATGAATGC ATTCATAGATGGGATCTTGTATTTGTATGAAAAGATGAAACTCTATAAAGAAGTAATTGCTTGCTATATGCAGAAACATGATCATGAGGGGCTAATTGCA TGCTGCAAAAGGCTGGGGGATTCAGGTAAAGGTGGGGATCCGTCTCTTTGGGCTGATGTACTTAAATATTTTGGTGAGCTTGGAGAAGATTGCTCCAAAG AAGTAAAAGAAGTTTTGACGTATATCGAGAGGGATGATATTTTGCCCCCCATGATTGTCCTTCAAACACTTTCGCGAAATCCATGCCTCACACTTTCTGT AATCAAAGATTACATTGCTCGGAAGCTTGAGCAGGAATCAAAGATGATTGAAGAGGACCGACAAGCTATTGATAAATATCAGGAAGATACACTATCGATG AGAAAAGAGATTCAAGATCTTAGGACAAATGCTAGAATTTTTCAGCTTAGCAAGTGCACTGCTTGCACATTCACTCTTGATCTCCCTGCTGTGCACTTCA TGTGCATGCACTCGTTCCATTTGCGCTGCCTTGGTGATAATGAAAAAGAATGCCCTGAGTGTGCTCCTGAATATAGGTCCGTCATTGAAATGAAAAGAAA TTTGGAGCAAAATTCTAAGGACCAGGACAGGTTTTTCCAGCAAGTGAAGAACTCCAAAGATGGGTTTTCTGTCATTGCTGAGTATTTTGGAAAAGGGATC ATCAGCAAAACAAGAAACGGATCCACTTCTGGTCTTGGTTCTGGAAATTCAACATCCAGTAGTGTCATCTGAGCTTTACAATTTGTGTCACTTCTATTTC ATCACTTTTCTGGATATTAGATGAAGTTGATTGTCTTTGGGCTATCTTCTCCATCACTGCTTGTTGTAAATAAAGCCTACATAATCTGGATTCCAAGGTT TATACTTTGACTGTTTTCTAAATGTGCTGGCTGTTAATATTTATATCAGGGAAAAGTCCAAAAACAACTCCAAAATTGTGCATGATGTGTGATTTGGTCC CTGAACTTTGGTTCCGGTGCCGATAGGCCTTCCCTGTTCAAAAATGCTCATTGAACTTTGCATGATGTACAAGTTAGTCCCTGAGCTCTCCTTCTTGCAA CCGAACCTCAAAGTTCAGGGCCTTTTGACACATTTTTAAATTCAAGAACTAAATGGTGTATCATGCAAAGTTTGGGGTAGTTTTTTGACTTTTCCTTTTA TATTATCCAGGTTGCTCATTCATCAAGTAAAGTTCCTGAATGGTCTTGCACTCTGTGTTATTGCAGAGTATTGAACTTTTTGGAAGGAATTCAAGTGGAC AAATAATAATTTATTGCAGCCTCTCCTTGGTTGAAATATTGGACAAATATTTAGGTCAATGTGTGGTTCAGTGGGTGTGAATTCAAGTGATACTTTTTCT TTTCTTTTCTTTTTTGTGTGTAAAATTATGAGGGATTGATTGAGATATTAAGATGAGATTTATATATGTATTTTAATTTTTTTGCAAAGGCCATGCATGA CAAATAGTAACAATATGAGTTCTGTGTTTTTGTCCACCATTTACTTCCTATTTATTTAACCTCAACTGGTGCTTGAGGTAGGATTGTTCATGGCACAATT TGGATAAATTTATTACATTTTAGAGCCTCTTCATAGTTAT
• Tissue: pods
• Gene name: LI_gene_134402;
• Additional information: details;

Expression of Ll_transcript_373635

FPKM

• PAB: 1.3
• PNAB: 3.8
• PS1: 2.2
• PS2: 2.1
• PS3: 1.9
• PW1: 2.1
• PW2: 2.4
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_373635

• Blastp: Vacuolar protein-sorting-associated protein 11 homolog from Arabidopsis with 75% of identity
• Blastx: Vacuolar protein-sorting-associated protein 11 homolog from Arabidopsis with 75.32% of identity
• Eggnog: Vacuolar Protein(ENOG410XRNZ)
• Kegg: Link to kegg annotations (AT2G05170)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461160.1)
• Pfam: Region in Clathrin and VPS (PF00637.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;