| Id Trinity | TRINITY_DN42290_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_373640 |
| Sequence | GGAGCAGACAACACACACTTCTCCTTTCTTCTCTCATTCTTCCCCAATTCTGAACCCTAAATCATCACCTCCGATCACCACTTCCGACCACCGCCACCGC CGTCGTCGCAGGTCCTTCATTCTCTCTCGTCGATTTATTTCCAAATATTCAGTGAGTTTCTTGTAAACTGTTTGGTGAAGCCTACGAATCGGTTGGATCA ATGTATCAGTGGAGGAAGTTTGAGTTCTTTGAGGAGAAGTATGCTGCAAAATGCACTATTCCTGATGAGGAGGTGGAGAATAGTGATGGTGGTGTTGTTG CTAACAAGAACAAGAAGATTCAGTGTTGTTCAAGTGGCAGGGGAAAGGTGGTGACTGGCATCGATGATGGGACGGTTTGCTTGTTTGATCGAGGCCTCAA GTTCAATTATGCATTTCAACCTCACTCCTCTTCTGTTCACTTTCTTCAGCAGCTCAAGCAACGCAACTTTCTGGTAACCATTGGTGAAGATGAACAGCTT ACTCCCCAACAATCAGCTTTGTGCTTAAAGGTTTTTGACCTTGATAAGATGCAAGCTGAGAGTTCAAGCACGGCGAGTCCTGATTGCGTTGGGATATTGC GAATATTCACTAGTCAGTTTCCTGAGGCAAAGATTACTTCTTTTTTAGTCTTGGAAGAAGTGCCACCAATACTACTCATAGCTATTGGCTTAAATAATGG TTCTATTTACTGCATAAAAGGAGACATTGCCCGAGAGCGTATCAACCGTTTCAAGCTTCAGGTGGAAAACCATTCTGACAAAGGTCTTTCCTGTGTTACT GGTCTTGGGTTTAAGGTGGATGGTCGATCTCTACAATTATTTGCTGTAACTCCAAGCTCAGTGAGCTTGTTCTCATTGCATGATGAGCCACCAAGAAGGC AAACACTTGATCAGATTGGATGTGGTCTAAACAGCGTTGCAATGAGTGACCGCTCTGAATTGATAATTGGTCGATCAGAAGCAGTGTATTTTTATGAAGT TGATGGTCGTGGTCCTTGTTGGGCTTTCGAGGGAGAGAAGAAATTGATAGGATGGTTTCGTGGATACCTTCTGTGTGTTATTGCAGATCAAAGAATGGGA AATCATACTTTCAACATCTATGACTTGAAGAATCGTTTAATAGCCCACAGTGTGTTGGTTAAAGACGTTTCTCACATGCTCTATGAATGGGGTAACATCA TACTCATAATGGCTGACAAATCAGCTTTATGTATTGGGGAAAAGGATATGGAAAGCAAGTTAGACATGTTATTTAAGAAAAACCTATATACTGTAGCAAT TAATCTTGTTCAGACTCAGCAAGCAGATGCTGCAGCTACTGCTGAAGTGCTAAGAAAATATGCTGACCATCTATATAGCAAGCAAGACTATGATGAGGCA ATGGCTCAGTACATACAAACTATTGGCCACCTTGAACCTTCTTATGTGATACAGAAGTTTTTGGATGCACAAAGAATCTACAACCTCACAAATTACTTGG AAAAGCTACATGAGAAGGGTCTTGCTTATAAAGATCACACTACACTTCTGTTGAACTGTTACACCAAATTGAAAGATGTTGAAAAGTTAAATCTATTTAT TAAAAGTGATGACAGCATCGGGGAACTTAAGTTTGATGTGGAAACAGCACTCAGGGTTTGCCGTGCTGCCAATTACCATGAGCATGCAATGTATGTTGCA AAGAAGGCAGGGAAGCATGAGTGGTACTTGAAGATCTTGCTCGAAGATCTTGGTAGATATGAAGAGGCCTTGGAATATATTTCAAGTCTTGAATCAAGTC AGGCAGGGATGACAATAAAGGAGTATGGTAAAATTCTAATAGAGCACAAGCCAGTTGAGACAATTGAGATTCTCATAAGGCTTTGTACAGAAGATGAAGA CAGAAGAGGAGACTCAAATGTTATATATGTATCTATGTTGCCATCTCCTGTTGATTTTCTTAGCGTTTTCATTCATCATCCTCAGTCCCTTATGGATTTT CTTGAAAAATATACCAATAAGGTCAAGGATTCGCCTGCTCAAGTGGAGATTCACAATATCCTATTAGAACTGTATATAGCCAATGAATTGAACTTTCCTT CAATGTCACAAGTTAATGAGGATGTAGAGTATGTTAATGTACCATCTGCTAAAACTCTGATTTTAAGTTCTCAGTCTAATGGAACCATTGCTGATCACAA AGGCTCACAAGAGGAAACAGACCGTCTTGAAAGGCGTAAAAAGGGTCTAAGCTTGCTTAAGAGTGCATGGCCTCCAGAGACAGAACATCCACTTTATGAT GTTGATTTGGCAATTATACTGTGTGAAATGAATGCATTCATAGATGGGATCTTGTATTTGTATGAAAAGATGAAACTCTATAAAGAAGTAATTGCTTGCT ATATGCAGAAACATGATCATGAGGGGCTAATTGCATGCTGCAAAAGGCTGGGGGATTCAGGTAAAGGTGGGGATCCGTCTCTTTGGGCTGATGTACTTAA ATATTTTGGTGAGCTTGGAGAAGATTGCTCCAAAGAAGTAAAAGAAGTTTTGACGTATATCGAGAGGGATGATATTTTGCCCCCCATGATTGTCCTTCAA ACACTTTCGCGAAATCCATGCCTCACACTTTCTGTAATCAAAGATTACATTGCTCGGAAGCTTGAGCAGGAATCAAAGATGATTGAAGAGGACCGACAAG CTATTGATAAATATCAGGAAGATACACTATCGATGAGAAAAGAGATTCAAGATCTTAGGACAAATGCTAGAATTTTTCAGCTTAGCAAGTGCACTGCTTG CACATTCACTCTTGATCTCCCTGCTGTGCACTTCATGTGCATGCACTCGTTCCATTTGCGCTGCCTTGGTGATAATGAAAAAGAATGCCCTGAGTGTGCT CCTGAATATAGGTCCGTCATTGAAATGAAAAGAAATTTGGAGCAAAATTCTAAGGACCAGGACAGGTTTTTCCAGCAAGTGAAGAACTCCAAAGATGGGT TTTCTGTCATTGCTGAGTATTTTGGAAAAGGGATCATCAGCAAAACAAGAAACGGATCCACTTCTGGTCTTGGTTCTGGAAATTCAACATCCAGTAGTGT CATCTGAGCTTTACAATTTGTGTCACTTCTATTTCATCACTTTTCTGGATATTAGATGAAGTTGATTGTCTTTGGGCTATCTTCTCCATCACTGCTTGTT GTAAATAAAGCCTACATAATCTGGATTCCAAGGTTTATACTTTGACTGTTTTCTAAATGTGCTGGCTGTTAATATTTATATCAGGGAAAAGTCCAAAAAC AACTCCAAAATTGTGCATGATGTGTGATTTGGTCCCTGAACTTTGGTTCCGGTGCCGATAGGCCTTCCCTGTTCAAAAATGCTCATTGAACTTTGCATGA TGTACAAGTTAGTCCCTGAGCTCTCCTTCTTGCAACCGAACCTCAAAGTTCAGGGCCTTTTGACACATTTTTAAATTCAAGAACTAAATGGTGTATCATG CAAAGTTTGGGGTAGTTTTTTGACTTTTCCTTTTATATTATCCAGGTTGCTCATTCATCAAGTAAAGTTCCTGAATGGTCTTGCACTCTGTGTTATTGCA GAGTATTGAACTTTTTGGAAGGAATTCAAGTGGACAAATAATAATTTATTGCAGCCTCTCCTTGGTTGAAATATTGGACAAATATTTAGGTCAATGTGTG GTTCAGTGGGTGTGAATTCAAGTGATACTTTTTCTTTTCTTTTCTTTTTTGTGTGTAAAATTATGAGGGATTGATTGAGATATTAAGATGAGATTTATAT ATGTATTTTAATTTTTTTGCAAAGGCCATGCATGACAAATAGTAACAATATGAGTTCTGTGTTTTTGTCCACCATTTACTTCCTATTTATTTAACCTCAA CTGGTGCTTGAGGTAGGATTGTTCATGGCACAATTTGGATAAATTTATTACATTTTAGAGCCTCTTCATAGTTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_134402; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_373640
| Blastp | Vacuolar protein-sorting-associated protein 11 homolog from Arabidopsis with 75% of identity |
|---|---|
| Blastx | Vacuolar protein-sorting-associated protein 11 homolog from Arabidopsis with 75.32% of identity |
| Eggnog | Vacuolar Protein(ENOG410XRNZ) |
| Kegg | Link to kegg annotations (AT2G05170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461160.1) |
| Pfam | Region in Clathrin and VPS (PF00637.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |