Id Trinity | TRINITY_DN42437_c0_g1_i2 |
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Name Transcript | Ll_transcript_444895 |
Sequence | ATTCTTGTACCAACCACTATTCCCAACAATCAACAACAACAACCACTAAATACCAACCTTGTAAGGTAAGTGACTAACACTTCTCAACTTCCATGTTAGG CCTTCTTCCTACTCACATTTCCTCTCTTATTCTTCACTTTTGTAACAACCATTGTTCCTAACATTGGATCTCATTTTGTTAAGCCTATGAATGGAAAAGT TAATACCAATTTTGTTGCTTTGTGTTCTCAATATTGTGTTGAACTTCAAGATCATAGCATTAGCTGATGATAATGGAAGTAGTGGTATTGCATCATCAGA AAGTAGTAGTAGTAGTAGTAGTAGTTGTAAGAATACAAATTATCAAACTTTTCTTCCTCCACCATTTCAGAATATATCTTCCACAATATGCAAACCTGTT TGGAATACATATGAATTGAGGTACACCAGAATTGGTGATACAACAAGTATTATATTATCTGCTCCATACACTCTTGGATGGGTAGGAATTGGATTTTCAA AAGATGGCATGATGGTTGGTTCAAGTGCTATGGTAGGATGGATTAATAAACATGGTCATGCAAATATAAAACAGTACTATTTAAGGGGCAAAAAGCACTC AGAAGTTATAGCAGATAAAGGTGAACTTCCACTAAATAATGTTCCTGCTGCTGTGGCAACAAATGGAGCTGAAATTTATTTGGCATTTCAGCTTCAAACC ACAACTCCATTTGGGAAGCAACCAATTTTATTGGCTTTTGGTACTAAGCTTCCACAGAACCATCATCTTTCAAAGCATGAGGACAAAACAGCTATTGTGT TTGATTTTTCCTCAGGTTCTTCTGGTCCATCATCCAATGGGTTGATTAAGATGAGGAAGAGCCATGGAATAATTGGTATAATAGGATGGGGTCTAATACT ACCTGTAGGTGCAATTATTGCTAGATACTTCAGGCATAAGGATCCACTTTGGTTCCATCTTCATTCAGTGATTCAACTTGTTGGATTTGCATTTGGACTT GGCACAGTTTTACTTGGATTACAACTCTACTCCAAAATGCATGCTCATATTCCAGCTCATAGAGGCATAGGCATCTTTGTCCTTGTGCTCAGTATTCTTC AGATATTGGCATTGTTCTTGAGGCCAAACAAGGATTCGAAAATCCGAAAGATGTGGAATTTATACCACAGTTGGTTTGGAAGAATGGCACTTATATTTGC AGCAATGAACATAGTGTTGGGAATGCAAGCTGCAGGAGCAGGGAATAATTGGAAGATAAGCTATGGATTCCTTGTTAGTATTATAATTGTTGCAGTCATT ATTTTGGAAGTATTGGCATATTTGAAAAGGTCAGAGAATCGTTCTCTTCACAATTTCCATATGGATCCTGCTACACAAGTTCCATTTCCAAGTAATCTAC CAAAAGGGTGAATGTGATTGCTCCAAGTTTTGCACTTCTACAAGTAGTGCCAAATTGATCAGCACAGACAAAATCACATTCTTTGGGCATATGATTTGAA TTGTTGAGCTTTCTTAGTCTAGATACTTAGGCAGTTAGCAGTTTGGCAAGTTGGAAAATCCCAACGTTTGAGCTTTCTTTTTTTGTTCATTGGGTTTCTT TTGCTGATTGGCCAGGAATATGTAAATTTGAATTGGTGTTGTTTTTGTGTAAAAAATGTGTTCAAATTTAAGAATCAGATTGGCAATTGGTAATGTTTCC TTACCACTGATCTTATTTTTGCCCCTTCTTCCAAGAAAGTGCCCACTTTTATATAAAGAACTTATTTAAGCCTATGTATATACTGCTATGGCTCAAGGTT GATAGAATGTTTCTATCTGAGGCAAGTTGTAACAAGGAATTTCAGTACTCCACACAAAGATTCTAATATTATTTTACATCCAAAAGGACATGAGTTCATA GCACACAAAGACTTACAAAGTTTTACATTTTTC BLAST |
Tissue | pods |
Gene name | LI_gene_134600; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_444895
Blastp | Cytochrome b561 and DOMON domain-containing protein At3g61750 from Arabidopsis with 48.95% of identity |
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Blastx | Cytochrome b561 and DOMON domain-containing protein At3g61750 from Arabidopsis with 53.44% of identity |
Eggnog | auxin-responsive protein(ENOG410Y10S) |
Kegg | Link to kegg annotations (AT3G61750) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019424144.1) |
Pfam | DOMON domain (PF03351.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |