Ll_transcript_351812

• Id Trinity: TRINITY_DN42515_c0_g1_i6
• Name Transcript: Ll_transcript_351812
• Sequence: ACATATAATAATAAAAGGCCCAATAATTTGATATTCAAATGAATCAATCCTATCCAATTGAATTGAGGATTTGAATCCGCCATGGCTGCAACTCCATTCC TTATTCTTCAACCACGTTTCAACTCCTACATCAACCCTCTCTTTCGTTCACTCTCTTCTTCACCTCTCTCATTCAATGCCGCCACTGCAATTCAATCCTC TCTCTCTCCACCCTCCGATACTCATTCCTCCACCGCCGCCGGTAGGTCAGGCGCGTTATCTCCCGCTCCGCCTCTCTCCGGCGCCGTGCAGAAGATCGAC GTGAATCCTCCCAAAGGAACGCGTGATTTCCCGCCAGAAGATATGCGATTGCGTAACTGGCTCTTCAATAATTTCAGAGAGGTTTCGCGGTTGTATGCGT TTGAGGAGGTTGATTTTCCGGTGCTTGAAAATGAGGCATTGTTCACTAGGAAAGCAGGGGAGGAGATTAAGGATCAGCTTTATTGTTTTGAAGATCAGGG TAAACGTCGTGTTGCACTGAGGCCTGAGCTTACTCCTTCTCTGGCAAGGCTGGTGATACAGAAAGGGAAGTCTGTGTCACTACCATTGAAGTGGTTCACT GTTGGGCAATGTTGGCGGTATGAGAGAATGACAAGAGGGCGTCGTCGTGAGCACTATCAGTGGAATATGGACATCATTGGCGTTCCTGGGGTTATGGCTG AAGCAGAGCTTATAGCCTCTATTGTCACATTGTTCAAGCGAATAGGAATTACAGAATCAGATGTTGGATTTAAGGTTTCCAGTCGAAAGGTTTTACAGGG AGTATTAAAGTGTTATTCCATACCTGAAAATTTATTTGGCAAGGTCTGCGTCATTATTGATAAAATTGAGAAGATTCCAGCTGAGGAGATAAAGAAAGAG TTGAAGGTTGCTGGTGTGTCAGAAGAGGCTGTCCATGAGCTATTAGAAGTTCTTTCTGTGAAGTCATTGGCGGAGTTGGAAGGTTCACCCTCTACAGTTA ATTGATACTGAAGTATTACAAATTTCCTGAAAATCGTATTTTGTTTCTTGCTATATAAAGTAACCTGTTATAGCTTGGTGCTTGAAAGCAGGTTTATGAT AAGAGTATAGGTGCAAGCTTTTGATGCTGGTATATAATTGCCCAAGTTATGGCATGTGCATAATGAAAACTGTATTCTTGTTTCATAGAGAATTTCTTTA TTTTTCATTTATTCTTCATACTTTTTTATAAAAGAAAAACTTCATTAAGATTAAGAGAAGCTGATTGCAAGGAATTGGGAGCATAAGACAAAATAATATA TAAAAAGACTAAAAGAGAACAAACAGAGAAGAAACCATCAATGAAGCAAAGCTGTCTAAATTTTCAACATTTCTGAAAGAGAAACCTCTTTTAAATGACC ATTGGCTTCACACCAAATAAAAGCCAAGAATTACACTCCAAAGATGCAAAAATGTCCTTCATTTCTCTTTTTGATAGAGGCGTTGTTTTTCTTCTTCTGA ATATCCTGGATGAGATTTTGAAATAATGGTTCATATTATTGTTGGTTGGCTACTTGAATTCATTTTTTGCTTCGACAGATGTATTTGTTTATTTTGGGTT GCCTATCATGTCCTAAAAATTTCTCCCAGCTTTCCCTTTCTCTTGAAGCTTATCACGTCACCATAAAGTTCATATACTCTGCATTAGTTTGTACAAAGCA AATCATACAAGTTATATTGAATCTAAATTTGGTTATATTCAGAGAGAGTCGATAGCTGTGGGGAAGCAATAGCTGATCTGAAACAACTATTCTTACTTGC TGAGAAGTTTGGCTACTCAAAATGGCTTCAATTTGATGCATCAATTGTTCGTGGCCTTGCTTACTATACTGGCATTGTATTTGAGGTTTGATTTTCTTCA TAGTCAGTACTTAATAGTCAATACATATTAGATGTTATCGTTACATGAATATGAATAATTTTGAACCTTGTTGGGCTAAGTTCTTGCTTGTGGACTTGCC TCTGTTGCATAATTAGATATTTTTTCCATTGGGTAATGACCTGATTCTGTGACAATTGTAAAGGTTCATTCAAATGTTCTGAAGTTCCTTAGGCAACGTG TTTTAAAATTTATACTCTTCAGGCATAATTGTGAATGGTTGCAAGTGGACTGAAGTTCTAACTGGTTTTTTTTTCTGCAACGAAGTTGTCTTCACTATGC CTTCCACTTACAGTTATTGAGTCAGAAAAACAGACTGTTTTTTTTGTTGCCATTGTTCTTATTATTGCACTAATTTGTAGCTATGGTGTAATTCGGCTGT TGTATTTCTTTCTCTCTTTCAAATGATTAAATTCTTCAGTAGGGTTTTGACCGAGAAGGAAAACTGCGAGCTATCTGTGGTGGTGGCCGATATGATCATT TGTTCTCAACTTTTGGTGCTGATGACATTCCTGCCTGTGGTTTTGGGTTTGGTGATGCAGTCATAGTGGAAGTAAGTCTATAACTTCTCAGTAGCAAGGA GAATGGGAAACCACCTTATCATGCATCATATCAAACTATCTTTTAGTGCACCTGATATCTTAACTGACGCCTCTGCACTTCTGTTTACTCTCTTTTATCC TTTTCACCTATTCTCGATTCACCTTTTCTTAATAGTTGCTCAAAGAGAAGGGTCTGCTGCCAGAGCTCAGCTTACAAGTTCATAACGTTGTGTGTGCATT GGATGAAGATCTTCAAGCTGCTGCTGCTATGGTTGCTAATCTTCTTAGAGAAAAGGGACAGAGTGTTGACTTGGTTTTGGAAAGCAAACCTCTTAAATGG GTTTTTAAACGAGCAGCCCGAACAAATGCCGAGCGGCTGGTTATAGTGGGGAGTTCTGAGTGGCAAAGGGGTATGGTTGGTGTCAAAATTCTGTCTACTG GTGAACAGTATGAGATTAAACTGGATGATCTAAAATAAAGCAGAATTTGAATTTTCCAGATATGTATTTGTCTCATTATACTTTCTAGGGTTTTCAGACA TGTATTTTTCAGTCAAGTACTTCACTTATGCCAAATACCTATTTTTTCTATCCCCTCCATGTGTATATGTATGAGCAGAAGGCCATACTATAGAGCTCAA TGGGATATTTTAACTTGAAATCTTTAGTTGAATAATTTGTTTGATAACCTATCAAAAACTTTTCATCTTACTTGTGTCCATACTAATGATGCTTACAAAC CATTGGTCTTTAATTA
• Tissue: pods
• Gene name: LI_gene_134699;
• Additional information: details;

Expression of Ll_transcript_351812

FPKM

• PAB: 0.4
• PNAB: 0.3
• PS1: 0.1
• PS2: 0
• PS3: 0.2
• PW1: 0.1
• PW2: 0.7
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_351812

• Blastp: Histidine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 74.54% of identity
• Blastx: Histidine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 78.8% of identity
• Eggnog: Histidyl-trna synthetase(COG0124)
• Kegg: Link to kegg annotations (AT3G46100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456673.1)
• Pfam: Histidyl-tRNA synthetase (PF13393.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;