| Id Trinity | TRINITY_DN42523_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_351777 |
| Sequence | AAGATTATTGGAGGTTATGAAGGAGTAGTTTATAATTGATTTTTTTTCTCATTTTCTAATATGAATATATGGCAAATTACATATTTATTCTATTTTAGTG TATCTGTTACCAAATGAACATTTTTTCCAGCTGAGAACAGAGGTGAATAAAGTCTTGGAGGTTGCTCGTACTGGAAAGTTAATCGGTGCCAGTTTAGATG CAAAGGTTCATATTTATACATCAGATGCCAGCCTAGCATCCCAACTATCTGAACTATCTGCAGCCAAAACTGATGCCGATACATTAAATCGTCTATTCAT AACATCTCAGGTTGAAATTCTTTCTTCATTGGAGGATGAACATAATGCAAATATACCATATAGTGGTGAATGCTTAATTCAGGGAAAGAGTAAAGTATGG GTTGGAATATCTAGTGCTGGTGGTTCCAAGTGTGAAAGATGTTGGAATTATTCAGAGCATGTTGGTTCATTTTTGGACCACCCTACCCTTTGCACACGCT GCCATGATGTTGTTGCTGTTCAGATGCCCCCTCAAGTAGCTCTAGCCACTTAAGGTTTTAAAGGGCATAAAATTTGTTTGGATTTTAACTTCAATTTTGT TTTCTAATTATAAAAATATTATCATTCTTGGATTTTAAATTTACCCACTTATTATTCTTGGACATTAATGTTATCAATAAATCAAAGTTCAACTCTTTTC CATCTCCTAAATTGATTTGCAGATTTGCAGATATGCCAATGACAGTTTGTGTAGTTCCTGTAGACTACATCATAAAAAATGTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_134706; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_351777
| Blastp | - |
|---|---|
| Blastx | Isoleucine--tRNA ligase, chloroplastic/mitochondrial from Arabidopsis with 58.33% of identity |
| Eggnog | amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) (By similarity)(COG0060) |
| Kegg | Link to kegg annotations (AT5G49030) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439298.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |