Ll_transcript_351716

• Id Trinity: TRINITY_DN42537_c0_g2_i2
• Name Transcript: Ll_transcript_351716
• Sequence: GTTATACCTTTCCCTTACTCCAAGTAATCCCAATTCTGCTTTTTCGGAGTATTTATCGCTAACACACACTCCACCTTCAATTTTATTACCCCTTTTTCCA TTCTTAACCCTTTCACCTTCTTCTCTTTTTACTTTATATAAACAAACTCTGCATTATTCACCCCTTTCATTCTAAATATGAATCACATTTCTCTTCTCCT TCTTTCCCTCTCTCTCCTCTTCGTTTCCGTCTTCTCATCGGACGGTGCAGACCCGTTGATCCGTCAAGTGATCGACGGTGGCGATGCGCGGTTGGGAGCA GAGGATCATTTCTCAGCGTTCAAGACCAGGTTCGGTAAAACCTATTCTTCAAGGGGAGAACATGATTACAGGTTCAAGGTATTTAAGGCTAACCTGCGCC GTGCTCAACGTCACCAGAACATGGACCCTTCCGCCACTCACGGTGTTACACGGTTCTCCGATCTCACACCGTCTGAGTTTCGTGACAGTGTTTTAGGACT GAGACGGTTGAGGTTGCCGTCTGATGCAAACAAAGCTCCTATTTTGCCAACTGATAATCTTCCAAATGATTTTGATTGGAGAGATCACGGTGCCGTTACC CCTGTTAAGAATCAGGGTTCATGTGGATCGTGTTGGAGCTTCAGCACAAATGGAGCATTGGAAGGTGCTCATTTTCTATCCACCGGAGAACTTGTCAGCC TCAGTGAACAACAACTCGTTGATTGTGATCATGAGTGTGATCCAGATGAGCCAGGGTCTTGTGACGCAGGGTGCAATGGTGGATTGATGAATAGTGCTTT TGAATACATCCTTAAATCTGGTGGGGTGATGAGAGAGGAAGACTATCCTTATTCCGGTACCGATCGCGGCACCTGCAAATTTGACAAGAAAAAGATTGCA GCATCAGTGGCAAACTTTAGTGTAGTTTCACTTGATGAAGACCAGATTGCTGCAAATCTAGTGAAAAACGGTCCTCTTGCAGTGGCCATCAATGCAGTAT TTATGCAAACATATATTGGAGGAGTATCATGCCCTTACATATGTTCAAAGCACTTGGATCATGGAGTCTTACTTGTGGGCTATGGTTCTGATGCTTATGC ACCAATTCGGATGAAGGAGAAGCCATATTGGATCATTAAGAATTCATGGGGTGAGAACTGGGGAGAAAATGGATACTACAAGATTTGTCGAGGACGAAAT ATTTGTGGGGTGGACTCCATGGTTTCAACCGTGGCTGCTGTTCATACCTCCACTACTTAGTAGGATGTATCCAATATCTATTTTAAACACTGTATAAATG GTTCCCCACGTTTTAAGGTGGTGCAGAAAGGTGGCTAACTTATGCAAATCTTGAAGAATAATTTCAAGAATGTATTTTCAATCAATGCAGTTCTCTTTAT TTGCAAAATATTAGAAAAGTGATTGTGTTGAGTGCGAGTCATAAGATGCAAAATATTAAATTGTTGTGTAAGTAATAATTATATTTTGTTATTCGGCTTG ATTCAGTTGCTTGAACACACAAGATAAGGACTTTATAAACACTTGTCAAGCAAATTTTTAGGCCAGGAAAAGGAGCGGTCCCTCATGTTGTTCACACTGT TCATTGGCTAGCAAATAGGAATTTAGTGCTAGTGAGACCATCCATGATGTTCCCATCACCTCTCCCATTTTAGCTGTTCCAATGGTGTCCCAATCCAATT AAAGATTGACACATAATTAAAAAGAATAATGATACATGTTTAATATTAATTATACTTATGTCTTTGTAATTACACTTAGCAATGGTGATTTGTATGAGGA TAAAAGAAGGAATGTATTATATGTAATTTCATTAAGTTATCAT
• Tissue: pods
• Gene name: LI_gene_134723;
• Additional information: details;

Expression of Ll_transcript_351716

FPKM

• PAB: 176.8
• PNAB: 24.8
• PS1: 42
• PS2: 41.4
• PS3: 58.2
• PW1: 26.7
• PW2: 32.9
• PW3: 26.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_351716

• Blastp: Cysteine protease RD19A from Arabidopsis with 76.83% of identity
• Blastx: Cysteine protease RD19A from Arabidopsis with 77.37% of identity
• Eggnog: cathepsin(COG4870)
• Kegg: Link to kegg annotations (AT4G39090)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454205.1)
• Pfam: Cathepsin propeptide inhibitor domain (I29) (PF08246.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;