Ll_transcript_444157

• Id Trinity: TRINITY_DN42603_c0_g1_i4
• Name Transcript: Ll_transcript_444157
• Sequence: GTCACTCTCTCTTTCTTTCTATCTATCTACCTTTGAAGAGAAAAGAATAGAAAAAAAATGGCTCTAACCTCATTTTCATCTCTAATCACCTTCAAACCTT CCCTCTTCACACTTCCACAACGACCCAACCACCACCACCGCAACAAACCCATCATCACCGCCAATTCCACAGACCCTTCTTCCAAATCACCACCCACCAC CGCTCCAATCTCCACCACTTGGAGCATCGATAGTTGGAAGAAGAAAAAGGCCCTTCAGCTTCCAGAATACCCAGATCAAAATGCCCTCGATCAAGTTCTC CAAACTCTTCACTCATACCCTCCAATCGTATTTGCAGGAGAGGCTAGGAACCTCGAAGAGAAATTGGGTCAGGCTGCAATGGGTAATGCGTTTCTGCTTC AGGGTGGGGATTGTGCTGAGAGCTTCAAGGAATTCAGTGCTAACAATATACGTGATACCTTTCGTGTTATTCTTCAAATGGGTGTTGTTCTTATGTTTGG TGGCCAAATTCCGATTATAAAGGGGTTGAGCCTTGACGATGAAAAAGGACTGTGTTGTATTGTTTTTTATAGGGAATATAGAATGCCCACCATGGTGCTT GAACCCAAACAGTGTTGTGTTGTGATTTGGGTTTGATCAAACTCGTCCTCTGGAGCACAAAGGGGTGTATCTCAAAGGCACTCCAAAGCTCAAGTCATTA TGGAATTTGGTTAGGGAAGTATGCCTGTACAGAAGAATGAAATCATTTATGGTTTGTGGGAAATAGCTACTTGTATAGGTGAGAATATTTGTGTAGCATT TATATAGGGGAATGTAGGGTAGCACTACTTGGCCGGGTGTAATGGGCGTGTGCTCCTTTGGTCGTTGAGGCAGGAGACTCCCTTGATTTGCGGCTGTCGC CTACCTCATGTTGTGCTAACATGGTCGGATCATGTAAAGCCAGGTTAAATGGGATGAGGGCGCCTGAGTCAGATTGAGTGGGTTTTGATCATCAATCATG GCAGAACTTGAGGTCACGGTCCAGATCACAATTATTTGAAGTTTTGGTTTTTTATTTTTGTTTTATGAGTAACTAATTTGGAGGAAGAGGAGGGCGCTTT TCTTGAGTTGGGTTGATCAAATCCTTCCGTTGAGATATGATAGGCAGGCCATTATCAAATTAGATGGAAAATTTGGTTAAAAAAATGTTTTCAGATAGGC AAATTAGTATTTTTACATTTTGGTGGTTTAAAATTTCATTATTAATGTGAATGACAATCTTTAGCTGTGGACATGATAACATAGGTGGGCAGAATGGCGG GTCAGTTTGCAAAGCCAAGGTCAGACTCATTTGAGGAGAAAAATGGAGTGAAGCTGCCAAGTTACAGGGGCGACAATGTGAATGGTGATGCATTTGACTC GGCATCTAGAATTCCAGATCCACAGAGGATGATAAGGGCCTATTGCCAATCTGTTGCTACTCTGAATCTTCTGCGTGCCTTCGCCACAGGAGGTTATGCT GCCATGCAAAGGGTCAGCCAATGGAACCTAGATTTCATGGAGAATAGTGAGCAGGGAGACAGGCATATTTTCTAACTTTTTTTTTCAGATTTATTTCAGG CTTTCAACTTGTCCATGTTTATTGATTCTTAATTTCTTATTCTCTGTATTTGAAAATTGAATCTACTCTTTTCATCTTATTCGAAAGTAGTGGAAGTCAA GGCATATAAGGAGGGTAAGGCTTCTCCTATGTGAGAATCAGTGTAAAGTTAGGAAGCAAGGATGTATTTTGATTAGTTAATTTGAGTTGAGATCTAAGTG CAATTTAGCTAATCAATGGTGGATAATCATTTACTTTGTCTAATTTTTAGAGGAGCCTTTTCCTAAAAGGGAATGGAAATTCAGAATAACTCAGATTACT TCCCTTGTCTTTCATTCTGCTTCCTAATAGGATCATATGGAGAAAAAAATGGGAGAAAATCAGAGGAAGGCTGGAAAGGATTAGAAGTGGACTAAAATTA AAGGCTTTGTTTTGCTTGTCTAGTAAACTTAATGAACAAAATGTGGTTATTTTGTAACGACTGATGAGATGGAGAAAAGAACATGAATCGAATTTTTTTC ATAATCATTGTGTACTTCCTTTCCCCTTTCAGTGTTAAAATTACGTTTGCTCCACCTTTATTGTAGTGATCCAGTAGAACTTAATCTAACTTAATAACCT TGTTGATAATGATAAGCATTAGCACTTCTTTTGTGCATTCTAAAGAAAAATGGATTCTGTTTAAACTTGATATTGCTCTCTCTTGAAGTTCTGACCCCAC CCAGTGGGTCTAAAAGGCTTGGTTGTTGTTCTCTCAGCTTCTATCAATTAGTTATTTTTTGGTTGGGCAAACAGGTACCGTGAATTGGCTCATCGGGTGG ATGAGGCTCTTGGCTTCATGAGTGTTGCTGGGCTCACAGCTGATCATCCAATCATGGCTACAACAGACTTTTGGACCTCTCATGAGTGCTTGCTTCTCCC TTATGAACAAGTGCTTACTAGGGAGGATTCTACTTCTGGACTTTACTATGATTGCTCAGCTCACATGCTGTGGGTTGGGGAACGCACCCGCCAACTTGAT GGAGCTCATGTTGAATTTCTGAGAGGAGTTGCTAATCCACTTGGCATCAAGGTGCATACATAGTGTTCCTCGTCTATGTCGGTGATATGTTTGGCTATGT CACCATTTTGGTTTGATTATAAAATTACTTTTTCACGTGCTTTATTTAGTATTTTTGTGTGTATACATTACTTATGCATATGCTTGACTCAGTCAATTAT TTGTTTTTGTCTTTTAATATGATGCTTAAGTACTTTAACTACAATCATATCTGAAAGGCCTTGGTCATGTAGGAGAAATTATTGGGTGGTCCAAGACACA TCTTCACCATTAATTATGCAATCATGAGTTAAGATAATAAGAGTTAATTCCAAATCTATGGTGAATATTTGTCCTTTACCATTTGTTCGGGACCATGCAG TAGTTTCTCGTATTGTATCCAATAAATATGCAGGCTGACAGAATTTGCAGCTGCTGAAACGGTACTTGGTTTTCAGGTGAGTGATAAGATGGATCCACGT GAACTTGTGAAGCTGATAGATATTCTGAACCCCAAAAACAAGCCTGGAAGAATTACCGTGATTGTTAGAATGGGAGCTGAGAATATGCGAGTGAAACTCC CACATCTTGTCAGGGCAGTGCGCAGTGCAGGTCAAATTGTCACTTGGGTTAGTGACCCCATGCATGGGAACACCATCAAAGCTCCATCCGGACTTAAAAC CCGCTCTTTTGATTCAATAAGGGCTGAGTTGAGGGCATTCTTTGATGTACATGACCAAGAAGGAAGCTACCCTGGTGGGGTTCATTTAGAAATGACCGGT CAGAATGTGACAGAATGTGTTGGAGGGTCCAAGACTATTACTTATGATGACTTGAGCTCACGCTACCACACTCATTGTGATCCAAGGCTTAATGCTTCTC AATCTCTTGAGCTTGCATTTGCTATTTCACAAAGGTTACGCAACAGAAGGCTTAATATGCAATCACTAGCATCCCTTAGAATTTAGATAAAGATGGGTCT TTCTTTGGTCTTTAATCATAAATACTGGTTTATGATCATGCATTATTTCTTGCAATAAAAAAGGGGTCCACCCGAATAAGAATTCCATGATATAATAACA ATGTGTTATATGGAAGTGTTTATTTCTCAATTTAGTTTTGATTCCTTCATTATCATCTAATCACATTCTTTTGAATCTTTACAAGAGAAGAAACATCATG TAAATTCCAATCCATGCAGATTAGTCTGCAATAACTCACTTTACC
• Tissue: pods
• Gene name: LI_gene_134813;
• Additional information: details;

Expression of Ll_transcript_444157

FPKM

• PAB: 0.2
• PNAB: 0.1
• PS1: 0.2
• PS2: 0
• PS3: 0
• PW1: 0.1
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_444157

• Blastp: Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic from Arabidopsis with 72.8% of identity
• Blastx: Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic from Arabidopsis with 85.88% of identity
• Eggnog: phospho-2-dehydro-3-deoxyheptonate aldolase(COG3200)
• Kegg: Link to kegg annotations (AT4G33510)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019418996.1)
• Pfam: Class-II DAHP synthetase family (PF01474.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;