Ll_transcript_451914

• Id Trinity: TRINITY_DN42732_c0_g1_i1
• Name Transcript: Ll_transcript_451914
• Sequence: GGTTTGATGGAGATGAGGTTGAAGGAGATGCGTGGATTGGGGTTTGAATTTGATAAGTTTACGTTAACACCGGTGATGCAAGTTTATTGCAATGCTCGTA GGTTTGATGAAGCTTTGAGTGTTTATAATACAATGCAGGAGAAGGGTTGGGTTGATGAGCGTGTTTATGCTATGCTCGTGTTGTCTTTTAGCAAGTGGGG AGAGGTGGATAAGGCTTTTGAGTTGGTGGAGAGGATGGAGGGACAAAGGATGGGATTAAATGAGAAGACTTTCTGTGTTTTGATTCATGGGTTTGTGAAG GAGGGGCGCGTGGATAAGGCGTGCCAACTGTTTGATAAAATGCTCATGGCAGGTTTCGTTCCTGATATTTCGTTGTATGATGTTCTCATTGGAGGGCTGT GCAGGAATAAAGAGGGTGACAAAGCATTGAGTTTAATTTCGGAAATGAAGGAATTTGGTATTCAGCCTGATGTTGGAATTGTTACGAAGTTGTTATCATC TTTTTCTAACAGAAGTATGATTGTGAAATTACTAGAGGAAATTACGGAAGAGGAAGATGACAAAACCGTTGTTCTGATTTACAATGCTATTCTGAATGGT TATGTGGATGATGGGTCGACTGATGAAGCGTATCGCCTTCTTCAGATGATGATTCAAAGCAAATCTAGTAGTGGTGGTGAGATGAATAGTTTCTTTTGCA TCAAGATATTGGTTTCTCCTAATACCACTTCCTTTAACATTGTTATTGATGGCTTACTGAAAAGTGGTCAGTTGGACCTTGCCCTAAGCCTTTTCCATGA TATGCAACAAATTCATTGTAAACCAAATATCTTGATCTTTAACAATCTGATCAATGATCTCTGCCATTCTAATAGATTGGAAGAAAGCTTTGAGCTCTTG AGAGAGATGGAAAAAGCGGGAATTGGACCAACTCATTTCACTCACAACTCAATTTATGGATGCCTATGTAAAAGAAAGGATGTTTTAGGAGCCATCGATA TGTTGAAGTTGATGCGTTCTTGTGGGCATGAACCATGGATAAAACATTCCACCCTTCTTGTGAAAGAGCTATGTGATCATGGGAGGGCTTTAGAGGCGTG TAACTTTCTTATCAACATGGTTCAAGAAGGATTCCTTCCTCATGTAGTTTCCTATTCTGCAGCTATTGGTGGCTTGATCAAGATTCAGGAAGTCGATCAA GCATTGAACTTATTCAGGGATTTGTGTTCTCGTGGCCGCTGTCCTGATGTGGTTACTTTTAATATATTGATAAGAGGGCTCTTCAAGGCCAACAGATTCA CAGAGGCTGAAAATTTACTGGATGAGATTGTTATGATGGGTCTTTCTCCCTCAGTTGTTACCTACAATCTGCTTATAGATAATTGGTGCAAAAGTGGTTA TGTTGATAAGGCTATGGCGCTTCTTTCCAAAATGTCTGGAGAGGACAGGGACCCCAATGTCATTACATACACAACTTTGGTGGATGGTTTATGCAGAGCA GAAAGACCTGATGATGCTGTTTCAGTATGGAATACGATGGAAAATAAAGGCTGCTCTCCAAATCGAATTGCTTTTATGGCACTTATTCACGGCCTTTGCA AATGCAGTAGGCCCACTGCAGCTGTCCGTTACTTACGTGAGATGGAACAGAAAGAAATGAAACCTGACTCCTTCATTTATGTTGTGTTGCTAAGTGCTTT TCTGTCTGATCTGAATTTGACCTCTGCATTTGAGATTTTCAAAGAGATGGTCGATTTAGGATTTTTTCCAGAACCACGTGATAAAAATTATCCCATTGCA ATTGATGCAATACTTAAATTTTCCAAGGATGACAGAACGTCTTCAGCTACCCAAGTACTAATCGAAGAGGGGAAAATTCCTAGACATTGTCTCTGAACTG TTGGAAGTGAAAGGTCGGTCAAATGTAATCAACCATTTTTGGCCATTGCTAAAGGAAGCTATTGTACTGGAAATAAAAGGAACTCTGCTAGATATCATAT TGACAGATTAGGGATCAAAACAATTTACAGAAAACCGTATCTGTTATTCTGTTATACTCCAGTTATAATTTGCCTACAGAGAGAATGTGAGCTCTGGAAT TTTTTAAGCTGAAAAAGAAAATCACATGTGCAATTTTTAAGCTGAGAAGGTGAGTCTCAGCGTAATGGTAAAGTTGTTGCTTAATGGCCAAGAAGTCATA AGTTCAAATCCTGGGAACAACTATTCACTTGCAGGGTAAGACTGTGTACATTTACTCTCCCCGACCCCATTAGATGGAAGCTATGTGCACCCGGCACAAT TTTTTTAGATGAGCATCTCATAATTTTCTCTGTTTATAGGTACTGTTTTAGAGCCTAATCTTGCTTTCTTTTGATGACCGAGTGTTTTTTTGGCACTGCT GAAAAAGTAATGTAATGTTAGCTGCACTAACCCCCATTGGGAAATAGGGACTATTGGATAGTAAGTATATAAGGTAAAGGGGAGAGACAGAAAGAGAAAA AGTGATGATGTAAAGTATGTGACTTATTTGAGAGAAGAAATATTATGTAAATGTAACATTCCTCCCAGCCATGGGAGAGAATGTCACAGCTCTAGTGTTG TGGCTATAGTTATTTGTCCTAGTGCTGCTACTCATGCAATGCTCCTTAGTGCTTAGTACTGTCCTCTGTATATTTACCTTCTATTGATTAATAAGAAAAT AACTCAAAGCATAGGATGCTTTAGTTACAAAGGTGTTGCATAGTAAGTTAATATCAAAATCTTGGTAACCATTGTAGTGCCTATTTTAGGGATTAATCCT TCATAGCCTTGTGTGCACTGGGTTGCCAATTTTTTGTCTGGAATCCTTCATAGGTTTATTGTACATCACAACACATGATGACTCAGAAGAAACTTACTAT ATGCTGAATATTGTTGTACATCAACATATTGGCTATCATGGAGACAATCAAGAAAGTAGTTCATTTAATGATCCATCAATAGAAGGTGATTTACTTTTCT TTTCATCAAATTGGTCTTACACTTTGTAACAATAACTTTTTGTGTGCAAGAATCACTGTTGGAACCTAGAGTTCAATGTCATTTATCTAAATGGATTTAT GTTTTAATTTAAAAA
• Tissue: pods
• Gene name: LI_gene_134993;
• Additional information: details;

Expression of Ll_transcript_451914

FPKM

• PAB: 0
• PNAB: 0.7
• PS1: 1.1
• PS2: 0.8
• PS3: 1.2
• PW1: 0.8
• PW2: 0.6
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451914

• Blastp: Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial from Arabidopsis with 49.61% of identity
• Blastx: Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial from Arabidopsis with 49.61% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G08310)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427774.1)
• Pfam: Pentacotripeptide-repeat region of PRORP (PF17177.3)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;