| Id Trinity | TRINITY_DN42748_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_451835 |
| Sequence | CTCATATCATCGTCCAAAACGACTCCTTCCTTTATTCTACGACACCGTTTTGAGAAATGCGTAACCACCTTTTCTCGCTCTCATTGCGTCGTTTACCTTT ACCACTCTCTCTCCCTCGCTTTCTCAGTTTCTCCATACCCGACGACGTATACGACCCGCCGTTTTCCCCTCCTCAAAAACCAAACGAAAGCAACAATAAC AACAAAACGAAGAAGAAGAAGAACGACAACGAAAATGGAACTACGAATTTAAATGAAGAGGCCAAATTTCCTTTGAAATCGGAACTTCCATTCGATTTTA AGTACTCATATTCGGAGATTAATCATTCCGTGAAACCTATAAGCTTTCGTGAATCACCTAAGTTCTCACCTTTTGGACCGGCCCGGCTCGATAGGAAATG GACCGGGACTTCTGCGCCGGTTCAGAAGGAAGTGGACCGGGTTAGGATTGAAGAGGAGAGGAAACGGGTTCTCGGAGACCCGCTTTCGGAGGAGGAGGTG GCTGAGCTCGTCGAACGTTATCGTCACAGTGACTGTGCTAGGCAAATCAATTTAGGGGGGAGTGACTCACAACATGTTGGATGACATACATAATCATTGG AAGAAGGCTGAAGCTGTGAGAATTAAGTGCTTGGGTGTGCCTACACTTGACATGGACAATGTTTGCTTCCACCTTGAGGACAAGTCTGGTGGGAAAATTA TTCACCACAACATTAATACACTCCTTCTGTACCGAGGTCGAAATTATGATCCCAAGAACCGTCCAGTTATTCCTCTTATGCTGTGGAAGCCTTACCCACC AATTTATCCTAGGCTTGTGAAGAATGTAATTGAGGGATTGACATTTGAAGAAACAAAAGAAATGAGAAATAGGGGATTGAACTCACACCCTCTGATGAAA CTTAGTAAGTGACTACAGTCTATTGGAGACTTGCAAATGTTACTCTTTTATTCTGACCTTTTTAGTATTAGATCCTAACATATGCTGAGTTGCGATTTCC ATGTTCAGCTAGAAATGGCGTTTATGTAAATGTGGTGGAGCGGGTGAGGGAAGCTTTTAAAACTGAGGAGGTTGTGAGACTGGACTGCACCTATGTGGGT ACTAGTGATTGCAAAAGGATTGGAGTCAAGCTAAGGGATTTAGTTCCATGTGTCCCTATCTTGTTTAAGGATGAGCAGATAATCCTTTGGAGAGGAAATG CAAATCAAGAACAACCTTCAAATCCACAATGTAGTATTGAAGTTGAAGAGTCTACAATATGAATCAGGAAATGTTAGAAAGATGGTTTGCTACTGACATT TAATCCAGTCTAGCATATGACTCTTATATATTTACTTAACTCATTGCAGAGGAGAATGTCACTTGACTATGATTCAAAGTTCATCTTCATTATTATGTGA AATTGTAGTATGATCCCATTTCCTTGAAGAATGAATCTGCAATAAAATGAGGTTACTATCAGTCAAATTTTGTATGAGTGAATCTTCATTATTTATCTTT AAATTTATTTTATATTGTTATTCGGTTAAGTTTATCTTTATCTTTTAGTTTTTATCTTAAGCATGGTTAAGTCTTTACTTAAGTCTTTATATAAACAGGA CCACTGAAGTAGGTTAAGATATGTCTTTGATGTTTTGAGTTGCAAGGGTTTTCTCTTGGAATAAGGTTCCCCTTCTTAGATTTTGTTTTCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_135017; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_451835
| Blastp | CRS2-associated factor 2, mitochondrial from Arabidopsis with 83.04% of identity |
|---|---|
| Blastx | CRS2-associated factor 2, mitochondrial from Arabidopsis with 58.85% of identity |
| Eggnog | RNA splicing(ENOG410YFAK) |
| Kegg | Link to kegg annotations (AT5G54890) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014629767.1) |
| Pfam | CRS1 / YhbY (CRM) domain (PF01985.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |