Ll_transcript_451817

• Id Trinity: TRINITY_DN42752_c0_g1_i1
• Name Transcript: Ll_transcript_451817
• Sequence: TTTGATTCTTCAAATGAGATTCCCTTTTGTTGGATTCATCACAATTCTTGTCCTTCTTGTTTTGCCATCTCATTCCAGCTCTTCCACCCCAGGAAATATA GAGAAGGAGAAAACTTTAGCGATTATTAAACCAGATGGATTGCTTGGTAACTATACTGATGATATCAAGAGAACAGTTTTAGAGTATGGTTTCCGCATTT TTAAGGAAAAGACTGTTCAGTTTGATGAGGCTACTGTGAAAAGATTTTATGCAGAGCACTCTTCAAAAAGCTTCTTTTCTAGCCTTACAAAATACATGAC AAGGTATCCGTCCAATGATTGTCTTGAACTCTTGACGCAGCTGAAATGTCAACCTCGTAATGTTTGGTGGCTTTCCTAATTGCTAGAGCTAGCTAGATCG TCTTTTACTAATTTCTTAGTGTTATTTGCTCCTTGCTGATGAAATTACTTCAACTTTTGTGCTCAGTGATATTTACCTCATTAGTTTTCCATTATCGCTT TATTCATTCATTGCCTATAGTTGATTAAGATTAAAGGCCAATTTCTATTGAGTTTCATAATTATAAGTCTGGTTTTAATTTATACATGTTAGTGGAAATG AAGTTACTGAATACATGATTACTTTAACTAAGGGGAAATGATTCTATGCAGTAGAGGATTCCATGCCAAGTGTTTTTTCTTCTCTCTTCTTTTAAAAAAA AACCAGAAATGGATTAAGCACTCACGCTTTAAAGCATATGCTATATAAATACCAACGGGAGAACAAAATCCTAGAGTAGGGAGGATTGTATCTTTTCTTT TTAAATTTTTTTCTCTTCTTTTTAATTTCCTTTCCATTTTCTCCTTTTAAGTCACTATAGAAGAAACTTTCTTTAATATACCTTATTCGTATTGGTATCG CATGAGGATTTTTAACCTTTGACTATCTATCTTAGGAAACTTTTGCTTCTCCAGTCTCCGCTGTAGCTATTAATGGTTCATCGATGTGATATCTACATAC CATTCATTTTAATCATATTTGATGTTGGTATTCCTTTCTGCACATGCTTTCTAGTTTTTTATTATCCTGAATCTCCTGTTCTGCTTCTCCATAAACGTTT TCAGTGGACCGGTGTTAGTTATGGTTTTGGAAAAGGATAATGCAATTGCTGATTGGCGTGCTTTAATGGGCCCTACTGATGCAAGGAAGGCTAAGATTAC TCACCCTCACAGCGTCAGAGCAATGTGCGGTTTAGATACTCAAAAGAATTGTGTTCATGGTTCTGACTCAACAAAATCTGCAGAAAGAGAGATATCATTT TTCTTCAGAGAACTCTCTGCAGGTCAGTATGGTTAAAATCTTCATCTCTCTAGTCATTAACATGTGCTACGAACACTAATAGAAAGATTGGAAGCTCCTT GTTTTTTTCAAAAGAAAATGGAAAGAAGGACTTCAGCATATGAACACAATCATGTTATGGTATCAACTTACTAATATAAGCATTATTCTTATATCTTAAC TAAGACAGGTTCAGTGCCAATTATCATACCTCTTATTTATTCCCCCAAAATGCATGTTAGTTACAAGAGAGCTCTCTACTTACTTTTGCCTCTCCAATTC TTTTTGACAGATGTAATTACAGAACATGATGAATTGTAGCTGGTAAAAGTTTGATGAAGAACCCCACTTTTATTTTGTTTTTTGGAGACTCTCTACTCTT GTATACATTCATATACAGGATTGCTTCAATGCCTATCACCACTTCTTTTTTTTTTGCTATCCTAAACTCACTTTGTTCTCAGATTGGGAGTTTTATGATT TTAATTTGTCATATAATTAATCTTATACTGATTGGAGAACATGATTCAGTAGGAACATTATGTATGGAACATAATTTGACTGGTGCACCACATAGTACAT AATATAAATTTTGATCCTAGATATTCGCAC
• Tissue: pods
• Gene name: LI_gene_135025;
• Additional information: details;

Expression of Ll_transcript_451817

FPKM

• PAB: 0.1
• PNAB: 0.2
• PS1: 0.5
• PS2: 0
• PS3: 0.4
• PW1: 0.1
• PW2: 0.3
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451817

• Blastp: Probable nucleoside diphosphate kinase 5 from Arabidopsis with 55.56% of identity
• Blastx: Probable nucleoside diphosphate kinase 5 from Arabidopsis with 74.32% of identity
• Eggnog: Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (By similarity)(COG0105)
• Kegg: Link to kegg annotations (AT1G17410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461922.1)
• Pfam: Nucleoside diphosphate kinase (PF00334.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;