Ll_transcript_451843

• Id Trinity: TRINITY_DN42753_c0_g1_i1
• Name Transcript: Ll_transcript_451843
• Sequence: CCGTCATTGGCTCATTTCATTGGCGTTCTGAAAGTGGAACCTGATAAACCCTAAACCTCACAAAACACTTTGAGAGACTTCAACTTCATCCAATTCGATG GCCGTCAACGATGCTGATCAATCAAACAAGTCTCACAGGATCCGTCAATCTGGCGCCAAAAAGGACAAGAAGAAGCTCAAGAAGAAAAAGCAGCAAGATT CTGATGATGATGATCAGAAACAGCTTAACCCTAAGGCATTCGCTTTTTCTTCCTCCAACAAAGCCAAGCGCTTGCAATCACGCGCCGTCGAGAAAGAGCA GCGCCGTCTTCACGTTCCCATCATTGACCGCTCTTATGGTGAACCTGCTCCTTTCGTCATCGTTGTGCAGGGTCCACCCCAGGTTGGGAAGTCACTGTTG ATAAAGTCTCTGGTTAAACATTATACGAAACAAAATTTACCTGAAGTTAGAGGTCCAATTACTATTGTGTCAGGAAAGCAAAGGAGGCTGCAATTTGTGG AATGTCCAAATGATATCAATGGCATGATAGATGCAGCAAAGTTTGCTGATTTAGCACTGCTTCTTGTAGATGGGAGTTACGGTTTCGAAATGGAAACCTT TGAATTCCTGAACATTTTGCAAGTTCATGGGTTCCCAAAGGTTATGGGGGTTCTTACTCATCTTGATCAGTTCAAGGATGCGAAAAAGTTGAGGAAAACA AAGCAACGCCTTAAACACCGGTTTTGGACTGAAATATATGATGGAGCTAAATTGTTTTATTTATCAGGCCTTATTAATGGAAAGTATGTCAAGCGTGAAG TTCACAATCTCGCTCGATTCATTTCAGTGATGAAGTTTCAGCCTATATCTTGGCGAACATCCCACCCATATGTTTTGGTAGACCGTCTCGAAGATGCCAC TCCTCCTGAAAAAGTGCATCAAAATAAGAAATGTGACAGAAAAGTCATACTTTATGGTTATCTTAGAGGCTGTAATTTGAAAAAGGGGCATAAGGTGTGT TCAGCAGTTCTATATTATTGTATCTCCATTGAAATTGAATTCATTAAAATCTAGAGCTTTTTTGGAAGAATATGCAAGGTATCAATTGCCTTCAGTTGGT ACTGGAGATGGTTTGGAGCAATAGGTTGGACATCAATGTCCTCATCCTCTTTTGTTTTTGTACTTCATGTTTTAGCATTATACTGATTAATAGCCAATTA TCAGAAAGATTATCCTGATGTGAACGGTGACCCTAAACCCTGATATCTGTATATGAATTAAATTTAATTCCAAAGTTACAAATTTTTTTGTCAACTAATA ATTTCTGTACTTTTATTTATGCACCCCAGTAACCCCCACCCCCCTGAAATATTCACAAACTCTTTCCTCCTCCTTATAGCATTTGGAGTATATTAGATAC GATGAATTCAGTAATGACATGGTATAACTGTTGTAGCTCAATGTTTGGTCAAAGTGTGCAATTAATAACTATCTGCTTGGAGCAACATGGTGCAAGGGGT GCTTAAATTACTATTGTGTTTATTTCCCCCATATGTTGGTAGTCTAACTTATATTTTGGAAACCAGGTGCACATAGCTGGTGTAGGTGATTACAGTTTAC CTAGTATTACTGCTTTACCAGATCCTTGTCCTCTTCCATCTGCTGCAAAAAAGAAAGGACTGCGTGATAAGGAAAAGTTATTCTATGCTCCAATGTCTGG CCTTGGGGATCTTATGTATGACAAAGATGCTGTATACATAAATATCAATGATCACCTTGTCCAGTTCTCAAAAGTTGATGATGAAAACTCAGCCATGACG AGCAAAGGAAAGGACAGAGATGTTGGGGAAGTTTTGGTGAAATCACTACAAAATACCAAATACTCAATTAATGAAAAGCTGGAGAACAGCAGTATCAATC TTTTTGGTCAAAAGCCAAAAGTGTCACCAGAAGATCTAGCTGATACACAGGATGATATAGCTGGAAAAGATGGCGAAGACAATAATGAAGTAGATTCAGA TGGCTCAGAATCATCTGATCAGGATGAAGCTGATGCCACGACCAAGGGTGACGCTTCTGGTTCTGATGATGAAGATGGTGATGCATCTGATAGTAAAACT ACCCCACAAGACCACTTAAAAGAACATATTGAGTTTATTGATGGGAGACGAAGAAGAGGAGTGATCTTTGGAAGTGATGTTAATCAAAACGAGCTGACGG ATTTAGAAGAAGAGGATGGTGCTGCCAGTGATGACGTGGCATCTTCTGATTCAGAATCTTCAAAAGAAGAGGAGGAGGATGACGAAAACAGTGACGATGA CAAAGATGAAGATTATGACATGGGAAATGTCTCAAAATGGAAAGAATCCTTGGCAGAAAGAACTCTCTCACGGAAAACTCCTAGTTTGATGCAACTTGTC TATGGAGAATCTGCTGTTAATTCAACCTCTATAGACAATGGGAATGATAATAGTGAGGATGATGAAAATGAAGAGGACTTTTTTAAGCCTGTAGAAGAAG TTAAAAAGAACACAAGAGATGGATTGAACGATGGAATGGTCAACGTTGATGATTGTTCCAAGTGTGCACATTTTGTGGATCAGAGATGGGATGAGAAAAA TAATGAGGATATTCGCAACCGTTTTGTGACAGGAAATTTGGCAAAAGCTGCACTCAGAAACCCACCACCAAAATCTAATACTGAAGAGGAGAATGGTGAT TTGTATGGTGATTTTGAAGATTTAGAAACAGGAGAAAAATATGAGAATATTCAGACAGATGATGCTACACCCAAGGGAGTTGATTTGGAAGCTGAGCAGC GTAGGCTTAAGAAGCTTGCTCTCCGTGCGAAATTTGATTCTCAATATGGTGATGACTCTGGGTCAGCAGAAGAAGATGCTGGTAATGAAAATGAAGTCAA ATTCCGCCGTGGTCAAACTAATGAAAGCAGCTATTTTGACAAGTTGAAGGAGGAGATTGAGCTTCGGAAACAAATGAATATAGCTGAACTCAATGAGCTT GATGAGGCTGCCCGAATAGAGACAGAGGGCTTCCGAACAGGAACATACCTAAGATTGGAGATTCATGATGTTCCTTGTGAGATGGTTGAATACTTTGATC CCTGCCATCCAGTATTGGTGGGAGGGGTTGGTCTCGGAGAGGAAAATGTTGGATACATGCAGGCCAGGCTAAAGCGGCACAGGTGGCACAAGAAAGTGCT AAAGACTAGAGATCCAATCATTGTTTCTGTTGGATGGAGGCGTTACCAGACAACACCAGTTTATGCTATTGAGGACATCAATGGAAGACATCGAATGCTA AAATACACTCCAGAGCACATGCATTGCCTTGCTATGTTTTGGGGCCCACTTGCCCCACCCAACACTGGGATAGTTGCTGTTCAAAATTTATCGAACAATC AGGCAACATTTAGGATCACTGCAACTGCTGTTGTAGTTGAGTTTAAACATGAAGCAAGAATAGTGAAGAAAATCAAATTGGTTGGTTATCCTTGCAAGAT ATTCAAGAAAACAGCACTTATAAAGGATATGTTTACTTCAGATCTTGAAGTAGCTCGATTTGAAGGTGCAGCTATTCGAACAGTCAGTGGTATCAGGGGG CAGGTCAAGAAGGCTGCGAAGGAAGAGTTAGGTAACCAGCCAAAAAGGAAGGGTGGGCAGATCAAAGAAGGAATTGCTAGGTGCACCTTTGAAGACAAAA TTCTGATGAGTGACATTGTTTTCCTGCGTGCATGGACTCAAGTTGAAGTTCCCCAGTTCTACAATCCATTGACAACTGCATTGCAGCCTCGTCACAAGAC TTGGCAAGGAATGAGAACCGTTGCAGAATTAAGAAGAGAAAACAATCTTGCTACACCTGTAAACAAAGATTCACTCTACAAGAAAATTGAAAGAAAACAA AGGAAGTTCAATCCAGTGGTGATTCCCAAGTCTCTACAGGCAAGCCTTCCCTTTGAATCAAAACCCAAGGATATTCCCAAGCGGAAGAGGCCTTTACTTG AAGAAAGGAGGAAAAAGGGTGTTGTGATGGATCCACGTGAGCGTAAAGTTCATGCTCTTGTTCAACAATACCAGTTAATTAGAAATGATAAGATGAAAAA GCGAAAGGTTAATGAAGATAAAAAGAGGAAAGCACATGAAGCGGAGAGAGCGAAAGAGGAGGAGTTGTCTAAAAAGCGGCGGAGAGAGGAAAGACGAGTG AAATACAGAGCGGAAGACAAGAAGATGAAGAAAATTCGTAGAGAATAGATCTACTGAGTTAATTGGCTTGAATATATTCTGCAGATGGTATTTGTCTCGA AGTATGAGTCCTGAGAAAATGGAATCTCCTTCCATTAATAAATGAACAAACTTAGTGTATTCATCATCATGGAGATTGTTTTGGAAATGGTGGTACTGAT TTATGAAAATACAGTTGGCATTTGAAGGATAAAGATGGTTGGGAAGTTAGTGAGCTGAGTATTAAGCATCCTGAATATCAATTTTGAGGCACTCTGATCA GGAATCTGTATGATACCTTCTATTACTTTCATTCTTATTACAAGAAGACCCAACATACATTATATGACAGGCTTTGAATTTTTGCATGCATATCAAAGAT GTTTTGTTCTTTTTTGTCATCTTTTCCTTTTCAGAGAGATTAATTTTCAACTGTCCAACCCGATTGGCTGCACATTAAAGAA
• Tissue: pods
• Gene name: LI_gene_135026;
• Additional information: details;

Expression of Ll_transcript_451843

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.1
• PS2: 0.5
• PS3: 0.1
• PW1: 0
• PW2: 0.2
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451843

• Blastp: Ribosome biogenesis protein BMS1 homolog from Homo with 42.37% of identity
• Blastx: Ribosome biogenesis protein BMS1 homolog from Homo with 43.51% of identity
• Eggnog: Ribosome biogenesis protein bms1(COG5192)
• Kegg: Link to kegg annotations (9790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413320.1)
• Pfam: 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal (PF04950.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;