Ll_transcript_451844

• Id Trinity: TRINITY_DN42753_c0_g1_i2
• Name Transcript: Ll_transcript_451844
• Sequence: TTGATTCTCAATATCCTTTTTTTTTGTTTCTCTTTTGATATTCTTGTTGTAGCCCTTGATATTATTTCAACGTGGAAAGCAAAAATGATTTATTTTTTAA TTTTGTGACACTGACTCATTTGGGGAGGAGGTAGGGAAGCGATAGAAAACAAGTGAGCTATATGGCATTCATTTTGTAACCTTAATTTTGATCCACATAT GGTGATGACTCTGGGTCAGCAGAAGAAGATGCTGGTAATGAAAATGAAGTCAAATTCCGCCGTGGTCAAACTAATGAAAGCAGCTATTTTGACAAGTTGA AGGAGGAGATTGAGCTTCGGAAACAAATGAATATAGCTGAACTCAATGAGCTTGATGAGGCTGCCCGAATAGAGACAGAGGGCTTCCGAACAGGAACATA CCTAAGATTGGAGATTCATGATGTTCCTTGTGAGATGGTTGAATACTTTGATCCCTGCCATCCAGTATTGGTGGGAGGGGTTGGTCTCGGAGAGGAAAAT GTTGGATACATGCAGGCCAGGCTAAAGCGGCACAGGTGGCACAAGAAAGTGCTAAAGACTAGAGATCCAATCATTGTTTCTGTTGGATGGAGGCGTTACC AGACAACACCAGTTTATGCTATTGAGGACATCAATGGAAGACATCGAATGCTAAAATACACTCCAGAGCACATGCATTGCCTTGCTATGTTTTGGGGCCC ACTTGCCCCACCCAACACTGGGATAGTTGCTGTTCAAAATTTATCGAACAATCAGGCAACATTTAGGATCACTGCAACTGCTGTTGTAGTTGAGTTTAAA CATGAAGCAAGAATAGTGAAGAAAATCAAATTGGTTGGTTATCCTTGCAAGATATTCAAGAAAACAGCACTTATAAAGGATATGTTTACTTCAGATCTTG AAGTAGCTCGATTTGAAGGTGCAGCTATTCGAACAGTCAGTGGTATCAGGGGGCAGGTCAAGAAGGCTGCGAAGGAAGAGTTAGGTAACCAGCCAAAAAG GAAGGGTGGGCAGATCAAAGAAGGAATTGCTAGGTGCACCTTTGAAGACAAAATTCTGATGAGTGACATTGTTTTCCTGCGTGCATGGACTCAAGTTGAA GTTCCCCAGTTCTACAATCCATTGACAACTGCATTGCAGCCTCGTCACAAGACTTGGCAAGGAATGAGAACCGTTGCAGAATTAAGAAGAGAAAACAATC TTGCTACACCTGTAAACAAAGATTCACTCTACAAGAAAATTGAAAGAAAACAAAGGAAGTTCAATCCAGTGGTGATTCCCAAGTCTCTACAGGCAAGCCT TCCCTTTGAATCAAAACCCAAGGATATTCCCAAGCGGAAGAGGCCTTTACTTGAAGAAAGGAGGAAAAAGGGTGTTGTGATGGATCCACGTGAGCGTAAA GTTCATGCTCTTGTTCAACAATACCAGTTAATTAGAAATGATAAGATGAAAAAGCGAAAGGTTAATGAAGATAAAAAGAGGAAAGCACATGAAGCGGAGA GAGCGAAAGAGGAGGAGTTGTCTAAAAAGCGGCGGAGAGAGGAAAGACGAGTGAAATACAGAGCGGAAGACAAGAAGATGAAGAAAATTCGTAGAGAATA GATCTACTGAGTTAATTGGCTTGAATATATTCTGCAGATGGTATTTGTCTCGAAGTATGAGTCCTGAGAAAATGGAATCTCCTTCCATTAATAAATGAAC AAACTTAGTGTATTCATCATCATGGAGATTGTTTTGGAAATGGTGGTACTGATTTATGAAAATACAGTTGGCATTTGAAGGATAAAGATGGTTGGGAAGT TAGTGAGCTGAGTATTAAGCATCCTGAATATCAATTTTGAGGCACTCTGATCAGGAATCTGTATGATACCTTCTATTACTTTCATTCTTATTACAAGAAG ACCCAACATACATTATATGACAGGCTTTGAATTTTTGCATGCATATCAAAGATGTTTTGTTCTTTTTTGTCATCTTTTCCTTTTCAGAGAGATTAATTTT CAACTGTCCAACCCGATTGGCTGCACATTAAAGAA
• Tissue: pods
• Gene name: LI_gene_135026;
• Additional information: details;

Expression of Ll_transcript_451844

FPKM

• PAB: 0.3
• PNAB: 5
• PS1: 2.9
• PS2: 3.8
• PS3: 4.5
• PW1: 3.2
• PW2: 2.2
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451844

• Blastp: Ribosome biogenesis protein BMS1 homolog from Homo with 52.05% of identity
• Blastx: Ribosome biogenesis protein BMS1 homolog from Homo with 52.17% of identity
• Eggnog: Ribosome biogenesis protein bms1(COG5192)
• Kegg: Link to kegg annotations (9790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413320.1)
• Pfam: 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal (PF04950.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;