Ll_transcript_451846

• Id Trinity: TRINITY_DN42753_c0_g1_i4
• Name Transcript: Ll_transcript_451846
• Sequence: CCGTCATTGGCTCATTTCATTGGCGTTCTGAAAGTGGAACCTGATAAACCCTAAACCTCACAAAACACTTTGAGAGACTTCAACTTCATCCAATTCGATG GCCGTCAACGATGCTGATCAATCAAACAAGTCTCACAGGATCCGTCAATCTGGCGCCAAAAAGGACAAGAAGAAGCTCAAGAAGAAAAAGCAGCAAGATT CTGATGATGATGATCAGAAACAGCTTAACCCTAAGGCATTCGCTTTTTCTTCCTCCAACAAAGCCAAGCGCTTGCAATCACGCGCCGTCGAGAAAGAGCA GCGCCGTCTTCACGTTCCCATCATTGACCGCTCTTATGGTGAACCTGCTCCTTTCGTCATCGTTGTGCAGGGTCCACCCCAGGTTGGGAAGTCACTGTTG ATAAAGTCTCTGGTTAAACATTATACGAAACAAAATTTACCTGAAGTTAGAGGTCCAATTACTATTGTGTCAGGAAAGCAAAGGAGGCTGCAATTTGTGG AATGTCCAAATGATATCAATGGCATGATAGATGCAGCAAAGTTTGCTGATTTAGCACTGCTTCTTGTAGATGGGAGTTACGGTTTCGAAATGGAAACCTT TGAATTCCTGAACATTTTGCAAGTTCATGGGTTCCCAAAGGTTATGGGGGTTCTTACTCATCTTGATCAGTTCAAGGATGCGAAAAAGTTGAGGAAAACA AAGCAACGCCTTAAACACCGGTTTTGGACTGAAATATATGATGGAGCTAAATTGTTTTATTTATCAGGCCTTATTAATGGAAAGTATGTCAAGCGTGAAG TTCACAATCTCGCTCGATTCATTTCAGTGATGAAGTTTCAGCCTATATCTTGGCGAACATCCCACCCATATGTTTTGGTAGACCGTCTCGAAGATGCCAC TCCTCCTGAAAAAGTGCATCAAAATAAGAAATGTGACAGAAAAGTCATACTTTATGGTTATCTTAGAGGCTGTAATTTGAAAAAGGGGCATAAGGTGCAC ATAGCTGGTGTAGGTGATTACAGTTTACCTAGTATTACTGCTTTACCAGATCCTTGTCCTCTTCCATCTGCTGCAAAAAAGAAAGGACTGCGTGATAAGG AAAAGTTATTCTATGCTCCAATGTCTGGCCTTGGGGATCTTATGTATGACAAAGATGCTGTATACATAAATATCAATGATCACCTTGTCCAGTTCTCAAA AGTTGATGATGAAAACTCAGCCATGACGAGCAAAGGAAAGGACAGAGATGTTGGGGAAGTTTTGGTGAAATCACTACAAAATACCAAATACTCAATTAAT GAAAAGCTGGAGAACAGCAGTATCAATCTTTTTGGTCAAAAGCCAAAAGTGTCACCAGAAGATCTAGCTGATACACAGGATGATATAGCTGGAAAAGATG GCGAAGACAATAATGAAGTAGATTCAGATGGCTCAGAATCATCTGATCAGGATGAAGCTGATGCCACGACCAAGGGTGACGCTTCTGGTTCTGATGATGA AGATGGTGATGCATCTGATAGTAAAACTACCCCACAAGACCACTTAAAAGAACATATTGAGTTTATTGATGGGAGACGAAGAAGAGGAGTGATCTTTGGA AGTGATGTTAATCAAAACGAGCTGACGGATTTAGAAGAAGAGGATGGTGCTGCCAGTGATGACGTGGCATCTTCTGATTCAGAATCTTCAAAAGAAGAGG AGGAGGATGACGAAAACAGTGACGATGACAAAGATGAAGATTATGACATGGGAAATGTCTCAAAATGGAAAGAATCCTTGGCAGAAAGAACTCTCTCACG GAAAACTCCTAGTTTGATGCAACTTGTCTATGGAGAATCTGCTGTTAATTCAACCTCTATAGACAATGGGAATGATAATAGTGAGGATGATGAAAATGAA GAGGACTTTTTTAAGCCTGTAGAAGAAGTTAAAAAGAACACAAGAGATGGATTGAACGATGGAATGGTCAACGTTGATGATTGTTCCAAGTGTGCACATT TTGTGGATCAGAGATGGGATGAGAAAAATAATGAGGATATTCGCAACCGTTTTGTGACAGGAAATTTGGCAAAAGCTGCACTCAGAAACCCACCACCAAA ATCTAATACTGAAGAGGAGAATGGTGATTTGTATGGTGATTTTGAAGATTTAGAAACAGGAGAAAAATATGAGAATATTCAGACAGATGATGCTACACCC AAGGGAGTTGATTTGGAAGCTGAGCAGCGTAGGCTTAAGAAGCTTGCTCTCCGTGCGAAATTTGATTCTCAATATGGTGATGACTCTGGGTCAGCAGAAG AAGATGCTGGTAATGAAAATGAAGTCAAATTCCGCCGTGGTCAAACTAATGAAAGCAGCTATTTTGACAAGTTGAAGGAGGAGATTGAGCTTCGGAAACA AATGAATATAGCTGAACTCAATGAGCTTGATGAGGCTGCCCGAATAGAGACAGAGGGCTTCCGAACAGGAACATACCTAAGATTGGAGATTCATGATGTT CCTTGTGAGATGGTTGAATACTTTGATCCCTGCCATCCAGTATTGGTGGGAGGGGTTGGTCTCGGAGAGGAAAATGTTGGATACATGCAGGCCAGGCTAA AGCGGCACAGGTGGCACAAGAAAGTGCTAAAGACTAGAGATCCAATCATTGTTTCTGTTGGATGGAGGCGTTACCAGACAACACCAGTTTATGCTATTGA GGACATCAATGGAAGACATCGAATGCTAAAATACACTCCAGAGCACATGCATTGCCTTGCTATGTTTTGGGGCCCACTTGCCCCACCCAACACTGGGATA GTTGCTGTTCAAAATTTATCGAACAATCAGGCAACATTTAGGATCACTGCAACTGCTGTTGTAGTTGAGTTTAAACATGAAGCAAGAATAGTGAAGAAAA TCAAATTGGTTGGTTATCCTTGCAAGATATTCAAGAAAACAGCACTTATAAAGGATATGTTTACTTCAGATCTTGAAGTAGCTCGATTTGAAGGTGCAGC TATTCGAACAGTCAGTGGTATCAGGGGGCAGGTCAAGAAGGCTGCGAAGGAAGAGTTAGGTAACCAGCCAAAAAGGAAGGGTGGGCAGATCAAAGAAGGA ATTGCTAGGTGCACCTTTGAAGACAAAATTCTGATGAGTGACATTGTTTTCCTGCGTGCATGGACTCAAGTTGAAGTTCCCCAGTTCTACAATCCATTGA CAACTGCATTGCAGCCTCGTCACAAGACTTGGCAAGGAATGAGAACCGTTGCAGAATTAAGAAGAGAAAACAATCTTGCTACACCTGTAAACAAAGATTC ACTCTACAAGAAAATTGAAAGAAAACAAAGGAAGTTCAATCCAGTGGTGATTCCCAAGTCTCTACAGGCAAGCCTTCCCTTTGAATCAAAACCCAAGGAT ATTCCCAAGCGGAAGAGGCCTTTACTTGAAGAAAGGAGGAAAAAGGGTGTTGTGATGGATCCACGTGAGCGTAAAGTTCATGCTCTTGTTCAACAATACC AGTTAATTAGAAATGATAAGATGAAAAAGCGAAAGGTTAATGAAGATAAAAAGAGGAAAGCACATGAAGCGGAGAGAGCGAAAGAGGAGGAGTTGTCTAA AAAGCGGCGGAGAGAGGAAAGACGAGTGAAATACAGAGCGGAAGACAAGAAGATGAAGAAAATTCGTAGAGAATAGATCTACTGAGTTAATTGGCTTGAA TATATTCTGCAGATGGTATTTGTCTCGAAGTATGAGTCCTGAGAAAATGGAATCTCCTTCCATTAATAAATGAACAAACTTAGTGTATTCATCATCATGG AGATTGTTTTGGAAATGGTGGTACTGATTTATGAAAATACAGTTGGCATTTGAAGGATAAAGATGGTTGGGAAGTTAGTGAGCTGAGTATTAAGCATCCT GAATATCAATTTTGAGGCACTCTGATCAGGAATCTGTATGATACCTTCTATTACTTTCATTCTTATTACAAGAAGACCCAACATACATTATATGACAGGC TTTGAATTTTTGCATGCATATCAAAGATGTTTTGTTCTTTTTTGTCATCTTTTCCTTTTCAGAGAGATTAATTTTCAACTGTCCAACCCGATTGGCTGCA CATTAAAGAA
• Tissue: pods
• Gene name: LI_gene_135026;
• Additional information: details;

Expression of Ll_transcript_451846

FPKM

• PAB: 0.2
• PNAB: 12.8
• PS1: 9.3
• PS2: 7.6
• PS3: 10.3
• PW1: 8.7
• PW2: 7.8
• PW3: 7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_451846

• Blastp: Ribosome biogenesis protein bms1 from Schizosaccharomyces with 39.85% of identity
• Blastx: Ribosome biogenesis protein BMS1 homolog from Homo with 54.83% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPBC31E1.06)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413320.1)
• Pfam: AARP2CN (NUC121) domain (PF08142.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;