| Id Trinity | TRINITY_DN42753_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_451847 |
| Sequence | CCGTCATTGGCTCATTTCATTGGCGTTCTGAAAGTGGAACCTGATAAACCCTAAACCTCACAAAACACTTTGAGAGACTTCAACTTCATCCAATTCGATG GCCGTCAACGATGCTGATCAATCAAACAAGTCTCACAGGATCCGTCAATCTGGCGCCAAAAAGGACAAGAAGAAGCTCAAGAAGAAAAAGCAGCAAGATT CTGATGATGATGATCAGAAACAGCTTAACCCTAAGGCATTCGCTTTTTCTTCCTCCAACAAAGCCAAGCGCTTGCAATCACGCGCCGTCGAGAAAGAGCA GCGCCGTCTTCACGTTCCCATCATTGACCGCTCTTATGGTGAACCTGCTCCTTTCGTCATCGTTGTGCAGGGTCCACCCCAGGTTGGGAAGTCACTGTTG ATAAAGTCTCTGGTTAAACATTATACGAAACAAAATTTACCTGAAGTTAGAGGTCCAATTACTATTGTGTCAGGAAAGCAAAGGAGGCTGCAATTTGTGG AATGTCCAAATGATATCAATGGCATGATAGATGCAGCAAAGTTTGCTGATTTAGCACTGCTTCTTGTAGATGGGAGTTACGGTTTCGAAATGGAAACCTT TGAATTCCTGAACATTTTGCAAGTTCATGGGTTCCCAAAGGTTATGGGGGTTCTTACTCATCTTGATCAGTTCAAGGATGCGAAAAAGTTGAGGAAAACA AAGCAACGCCTTAAACACCGGTTTTGGACTGAAATATATGATGGAGCTAAATTGTTTTATTTATCAGGCCTTATTAATGGAAAGTATGTCAAGCGTGAAG TTCACAATCTCGCTCGATTCATTTCAGTGATGAAGTTTCAGCCTATATCTTGGCGAACATCCCACCCATATGTTTTGGTAGACCGTCTCGAAGATGCCAC TCCTCCTGAAAAAGTGCATCAAAATAAGAAATGTGACAGAAAAGTCATACTTTATGGTTATCTTAGAGGCTGTAATTTGAAAAAGGGGCATAAGGTGCAC ATAGCTGGTGTAGGTGATTACAGTTTACCTAGTATTACTGCTTTACCAGATCCTTGTCCTCTTCCATCTGCTGCAAAAAAGAAAGGACTGCGTGATAAGG AAAAGTTATTCTATGCTCCAATGTCTGGCCTTGGGGATCTTATGTATGACAAAGATGCTGTATACATAAATATCAATGATCACCTTGTCCAGTTCTCAAA AGTTGATGATGAAAACTCAGCCATGACGAGCAAAGGAAAGGACAGAGATGTTGGGGAAGTTTTGGTGAAATCACTACAAAATACCAAATACTCAATTAAT GAAAAGCTGGAGAACAGCAGTATCAATCTTTTTGGTCAAAAGCCAAAAGTGTCACCAGAAGATCTAGCTGATACACAGGATGATATAGCTGGAAAAGATG GCGAAGACAATAATGAAGTAGATTCAGATGGCTCAGAATCATCTGATCAGGATGAAGCTGATGCCACGACCAAGGGTGACGCTTCTGGTTCTGATGATGA AGATGGTGATGCATCTGATAGTAAAACTACCCCACAAGACCACTTAAAAGAACATATTGAGTTTATTGATGGGAGACGAAGAAGAGGAGTGATCTTTGGA AGTGATGTTAATCAAAACGAGCTGACGGATTTAGAAGAAGAGGATGGTGCTGCCAGTGATGACGTGGCATCTTCTGATTCAGAATCTTCAAAAGAAGAGG AGGAGGATGACGAAAACAGTGACGATGACAAAGATGGTGCAATTTTCCCCTTTTGATTGTTAAGACTTGTATCTTGTCTGTTCATATCTGGTTGTATAAA TGTATTGACTATTGACGTCATGCTCTCAGTACTATGTTTTGTAACTCAATGTTCAGTCAAAATGGATAATAAGATCTTACACGACATTGTTTTATCACTT CCCATGCCAATTGCTACACACCAGTGAGTGACTTGTTACTTGAGGTTTTATATCGTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_135026; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_451847
| Blastp | Ribosome biogenesis protein BMS1 homolog from Homo with 53.24% of identity |
|---|---|
| Blastx | Ribosome biogenesis protein BMS1 homolog from Homo with 54.83% of identity |
| Eggnog | Ribosome biogenesis protein bms1(COG5192) |
| Kegg | Link to kegg annotations (9790) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413320.1) |
| Pfam | AARP2CN (NUC121) domain (PF08142.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |