| Id Trinity | TRINITY_DN42804_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_471042 |
| Sequence | CCCTTATCCAAGTCATTGTTTGGAGGATAGAAGCTAAATGCCATGAACTCCATATTCACATGAATAAGCAGAGAAGGTGATAAAAAAGAAATAGAGCATT GGTGTATAGACTAACAGACAGATTAAAAAAGAGTTTGGATGTGCGGAAAATACGCTTGGTGAAGAGGTAGCTACGTACTAAATGATTAATTCTCTACCGA AAAGTGAAACAAAAAAACAGAGAAGGTGGTAAATGAAGCAACCACATCTCCGTGTTAACTTGGTAAAGTGAATAAACAAACTCCTCTTCTTCTTCGTGGG GGTTAACAATTTCGTTACATCTCAGGCACGTGGACCAACCACCACTTTTTCTCTTCCGGTAACCGGTAACCGCCGCCATGACGCTTCTCACTCTCTTCGT CACCGCCACCAAGCTAGCCGGAGCTCTGGTCACGCTCTCCGTTGCCGCCAATGCTTTCTCATTCTCCCGTTTTCGCAACAAGAACCTTCGTACTTTCCGC TCCCCTATCAATGACAACGATGACACGCTTGCTGACTTCAACGTCACCGAAGTAGAAGATGGATTTTTCTTTGGTCTTGCCACAGCACCAGCACATGTCG AGGATAGGCTAAATGATGCTTGGATCCAGTTTGCTGAAGAAAAGACTGATAATGACTCACAGGAAGAAGAGATCAAGCAGCCAGTGGATGCTTTGATAGG TTCTGCTGCTGGTGACGGTGGCTCTCAAGCCGCTACATCATCACAACATGGTGCTAAACAAGTAAAGAAGGGTAAGAAGCCTCTGAAGGTCTCTATGGAG GCCATGATTAGAGGATTGGAGAAGTTCGTAGATGTAGAAGGACAAGAAGCAGAAGAAGAACCCCATTACAAAGTAACTGCTTGGCATAATGTTCCACACC CGGAGGAGAGATTAAAGTTTTGGTCTGATCCTGATACAGAACTAAAATTGGCCAAAGATACTGGTATTACTGTTTTTCGCATGGGAATAGATTGGTCAAG AATCATGCCGGAGGAGCCAATAAACGGCCTTAAAGAATCTGTTAACTATGCTGCATTGGAGCGTTATAAGTGGATTATCAATAGAGTTCGATCATATGGA ATGAAGGTGATGCTCACTCTTTTTCATCATTCACTTCCACCCTGGGCTGGTGAGTATGGAGGTTGGAAGCTGGAAAAGACAGTGGATTATTTCATGGACT TTACCAGGCTTGTTGTAAATGGTGTAATAGATTTGGTTGACTATTGGGTAACATTTAATGAGCCTCATGTCTTCTGCATGCTTACTTATTGTGCTGGAAC TTGGCCTGGTGGTCACCCTGATATGCTGGAGGCTGCTACTTCTGCCCTTCCAACTGGTGTTTTCCAGCAGACCATGCATTGGATATCTGTTGCACATTCA AAGGCATATGATTACATCCATGAATTCAGTAACTCATCGAAGCCAATAGTCGGTGTATCACATCATGTGTCATTTATGCGACCCTATGGTCTGTTTGATG TCGCTGCTGTTTCACTGGCTAATTCATTGGCTCTCTTCCCATTCATCGATGGAATATCTGCCAAGCTGGACTTTATAGGCATAAACTACTATGGGCAGGA AGTGGTTTCGGGTACTGGCCTGAAATTGGTGGAAAGCGATGAGTACAGTGAATCTGGTCGTGGAGTATATCCTGATGGCTTATACCGTATGTTGCTTCAG TTCCATGAAAGATACAAACATCTAAATGTCCCCTTCATCATTACTGAAAATGGAGTTTCGGATGAGACAGATGTGATCCGCCAGCCATATCTCTTGGAGC ATCTGCTTGCTGTTTATGCAGCTATGACTATGGTTTTGACACTGAATTAAATTTTATTTTCTTAAAATCAAGTTATTCTGTCCTAAAATCTAATTTATGA TATGCCTTCTTGTAATTGTTTTACAGGGTGTACCTGTGCTTGGTTACCTGTTCTGGACTATTTCTGATAATTGGGAGTGGGCTGATGGATATGGTCCCAA GTTTGGACTTGTAGCAGTTGATCGGGCAAACAATCTTGCACGGATTCCCCGTCCTTCTTACCATCTATTTTCTAAAATTGTGAAGAGTGGTAAAGTTACA CGTAATGATCGTGAAGGAGTGTGGGATGAACTCCAGAGAGTTGCTAAAGAGAGGAAAACAAGGCCATTTTATCGGTCTGTGGACAAACATGGTTTCATGT ATGCAGGTGGACTTGATGAACCTCTACAGCGACCCTATATTGATCGTGATTGGCGGTTTGGTCACTATGAGATGGACGGTCTCCAGGATCCCTTGAGCCG CTTCGCAAGATTCATTACTCGGCCATTATCCCTAAAATGGATAAGGAAACCTCAAAAGAAGAATGCCAAATTAGTTCTTCAGCCTCTTGAAGTTAGCAGC TGATAACTTACCTATTTGTGTCATAAATTCTTTCTGTTTTAGTGATAGACACTTTCAATATTCAACACAAGATACATCGGAGCCTAAGTTTCTTGATGTC TGTAATATTGTAATGCGTTTATTATGATGCCTTGTTGTAAGCTGCTGTAACATTGTACTATGTTTTCATTGCGTAAGATAGCTTTGCTCTTATCTTCCAC TGGCAACTGAAAAATAATTTTGAAGTACTAACTTTCACTTGTCAAGTTTAGTCTTCTAAGCATTAGGTTATGGACTTAGTGGAATCCCAACAATTGCACA ATAAAGCAATCTCAGTATCCAGCTTAGTTAGTGCTGCACGTAAATGTCCACTCCCAAATCC BLAST |
| Tissue | pods |
| Gene name | LI_gene_135098; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_471042
| Blastp | Beta-glucosidase-like SFR2, chloroplastic from Oryza sativa with 67.99% of identity |
|---|---|
| Blastx | Galactolipid galactosyltransferase SFR2, chloroplastic from Arabidopsis with 63.51% of identity |
| Eggnog | beta-glucosidase(COG2723) |
| Kegg | Link to kegg annotations (4351127) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419477.1) |
| Pfam | Glycosyl hydrolase family 1 (PF00232.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |