Id Trinity | TRINITY_DN42820_c0_g1_i1 |
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Name Transcript | Ll_transcript_471104 |
Sequence | TTTTATTTAAGAATCAAACTCTCTCTCTCTCTCTCTTCCTAATTCCTATATATAGCTAATCACATTTATGTGAATACATATAAAATTGCAAGACTAGTAC TGTTTCACAAAATGCAACAACATGATATATGCAATCCTAATGTTAAAGAACCTCGTCTTGTGGCCACAAAGTTCTTGGCCAGACCTCAACATGAAGGTGT TGGAGCAGTTGTCAGAAGAAGCATAGGAAGATTTGACCTCAACTACTTTGATCCTTTCCTTGTCTTGGATGAATTCTCAGTCACTGCTCCTGCTGGATTT CCTGATCATCCACATAGAGGCTTTGAAACTGTCACATACATGTTGCAGGTACACCAAACTTTATTTAATTCTTTTTACCTCATTGTATAAAACTATTACC AAATATTTAAGATACATTTTTATATAAGCTATGTTAATTTGTTTGTTTAATAAATAAATATTCCAGGGAGCTATAAGCCATGAAGACTTTGAAGGACACA AGGGGAGAATAGAAGGTGGTGATATACAGTGGATGACTGCAGGGAGAGGAATAGTGCATTCAGAAATGCCAGCTTCTCAAGGAACCCAAAAGGGTTTGCA ATTGTGGATCAACCTTGCTTCTCAACATAAGATGTATGTTTATAATACCTTTCTATCTATACAAATATTCTCTTACCTAATTCATTCATACTTATTCTTA CTTTCAATTTAATAATAAATCTCCAATCATAATGTGGCCTTAGACCAGGATTTGATGATGTGTTTATTATGCTCACAAGTTAAGATAGAAAAGTAATGAG ACAAAAAGGAATTTCAACCTTTAAAAAAAGTAAAAATTGTTTAAAACTTATTGAATAATTAAGATACATGCCTTCCTCACTTTCACATGTGACTTTATCT CATGATTCCTATGATGGACCATTTCCTACATGTGCATTTGAATAGAGCACTAATGATGGAAGTGTGCTTCAGGGAACATACATGCCCACCATAAACAGTG TCCATATATTCCGTGGTGTTGATAGAAGCTTCAATTACAAGGGTAACAACATGTTGCAGCTGCTAGCTTCATAATTTGTCTGGTTTTGGGTTACCCCTTT TATATAAATAGACTTTAACTATGTGCCAAAAATAGAAAAAGACTAATATAACTTTAAGCTGCCCTTGTCATAAATATAAATTCAAAAAATATAACAGTTT CTTATTAGGAAGTTAAACTTTGGTTTTAATCTGTCATTGTACTTTTGTAACTATAAAAATATGTGATTGTAATTTTATGATAGGGTTGAACCAAGGTATC AAGAAATGTTGAGTAAAGACATAGGAGAAGGTATTAAAGATGGTATAAAGGTTAGAGTAATAGCAGGGGAAGCTCTTGGGGTAAAGTCTCCCATCTACAC AAGGACACCAACTATGTACTTGGACTTCTCTCTTAAACCAGGAACACACTTACAACAACCTATACCAAAATCTTGGAATGCTTTTGTTTATGTCTTGGAA GGAGAGGGTGTCTTTGGCAACCCAAAATCTCACCCTACAAACTCTCATCATATTCTTCTTCTTGGTTCTGGTGATGGCCTAGAGGCGTGGAACAAATCCT CTAAGCAACTTAGGTTCATTCTTGTTGGAGGTGAACCACTTGGTGAACCTGTGGTCCAATTTGGACCCTTTGTCATGAATACTCAAGAAGAGATTGACCA AACAATTGATGATTTTGATAACTATGCTAATGGATTTGAGAAGGCCAGACATTGGAATTCTGAATAGTGGAGTTAATCTTGTCCTATTTGACTTTATTTA AGCTCACATTGGTTGGTTGATTTGGATATTATTTTAAATGAGATGAAGGATGTTCCAATTCCTTTTAATGTAACATGGAATATGAATCAAATAATAATTT CCATTCATTCTTTACTAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_135123; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_471104
Blastp | Pirin-like protein At1g50590 from Arabidopsis with 67.95% of identity |
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Blastx | Pirin-like protein At1g50590 from Arabidopsis with 67.88% of identity |
Eggnog | pirin domain protein(COG1741) |
Kegg | Link to kegg annotations (AT1G50590) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019460983.1) |
Pfam | Pirin C-terminal cupin domain (PF05726.12) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |