Ll_transcript_471122

• Id Trinity: TRINITY_DN42837_c0_g1_i5
• Name Transcript: Ll_transcript_471122
• Sequence: CTAAAATATACTATCTATCTATCTATCCATTATCTGCATTGAAATGGCATCAACAACATCATGGGCAGGACTATGGTTTCTCACTAGAAACACCACTTTT TCAACTACAAACACAAACACAAGCCTTGAGTTCTCAGTTCTAAAACCAAATGCTGGATCTTTTCGATTATTCTCACCTTATTCTTTGTTTCATAATGGCT CAACATCACTCACTCAACGCTCATGCAAGTGTTCCTATTCTGCTCCTGTTTCCACTAGAACCTATGAGTTTTCTGATACATCTTCAGAAGTGGAGCTGAG ATTAAATTTAAAAGGACTGGATATTAAAAGTTCAAAAGAGATATTGGTTGATACAAGTGATTCCTCTTTAGCTATCAGAGCATTGCGGCCAGGACTTCCT GTCACACTTATAGAAACCAATCGTCTTTTTGACAGAATTAAACCCTCCGAAACGATATGGTATATAGATGACGATGAACTGGTTGTGAACTTCAAGAAAC AGGACCCTGATTTGAAATGGCCTGATATAATGGAATCATGGGAATCACTTACAGCAGGATCTGCACAACTTTTGAAGGGAGCATCAATCTACCTTGTTGG CAATTCAACCGAAATCAACTACAAAGTGGCTCAAGAGATAGCAACTGGTCTTGGGTACACACCACTTAGTACAAAAGAGTTGCTGGAAACTTATTCCAAC CAAACCGTGGATTCCTGGCTGCTTGCTGAAGGTTCTGATTCAGTTGCAGAAGCAGAAAGCGCAATTCTTGAAAGCATAAGTAGTCATGTTAGGGCTGCAG TTGCAACGTTAGGAGGGCAACACGGTGCTTCTGGCAGACCTGATAAATGGCGGCATCTTTATGCAGGATTTACTGTCTGGTTGTCACAGACTGAAGCCAC AGGTAGTATTTTCAATCCATTCTTGGATCTTCATTGCATCTTATCGGATAAACATATGCAACCCAACCTTGTTTTGAATCTTCAAATTCACTCATTACTT GAACTAAAATATGGATGAGTCACCTAAGCCTCAACTTGAATCATGAAGAAACTTTTACTACTACTAAGGCCTTGTTTGATACAGGCTTTGAGTGGAGAAG AGAAATTTTGAAATAAGCCTAACCATTGTTTTTGGGTGTATTTAAAATGAGAGGAGGAAGTTGTGGAATTGCATATAACCTCCAGAACCATCCCTTATTA ATTTTTGCAAACATCTTAAAGTTCTCCCACTTTGGTGAATCATGGTGGAGTGAGAGTCTAAACTTCCAAATAAGGGAAAGGAAGCCTAGTAATTAACCTT TCAAACTCTGCTCTCAGCCCTTCATTTTTTTCGATACCTTCTCCACCCTTCCTCTCTCATCTCCCAACTCCTAAACATACCCGAAATGTCTATGAAGACA TGTTCATTCACTGGCATGATTGCATCAGCCAGTTGTTTACACTAAAAAACAATTTTGATAGCTTAAAATACAGATGAAGATTCTGCAAAGGAGGAGACCC GTAAGAACGTCAAGGATGGCAGGCTTGCATACACAAATGCTGATGTGGTTGTTAAGCTACAGGGCTGGGACTCTGCTTATGCCAAGAATGTGGCACAAGC ATGCTTGAGTGCCTTAAAACAGTTAATCTTGTCAGACAAGAAACTTCCAGGTAAAAAAAGCCTCTACATAAGATTGGGATGTCGTGGTGATTGGCCAAAT ATCAAACCCCCTGGTTGGGATCCATCAAGTGAAGGTGACAGAAGTCTTGGTACACAATAGTGTAACATGAAATTCGGTTAGCCACAAAGTTTGTGTATAC AAAGTTCATGTATTACCACAAAAATATAAGAGACAGCTTCTGTGGTTCAAGTCGTTATTAAGCTATATAATATTAGTTTTGATTGCCACATGATGGAAGG TGCAACATGATTAAGGGCTCCCACTAAATCACAAGTATCTACTAACAGAGAATTTGTAGAAGAAAATGTTGAAAGAGTATGTTCTTAGCGTTGCTCAAAT GTGTATACTTTGGTACTCTTGTGTTATTAAGAAATTCCAAGTAAAGGCTAAGAATCGTATTCCTATTATTAGCATTTTTGCTTAAAACTTCTGATCAGCA TTTATAACTGTAGTACATGAGCTGCAATACTTAGTCGTTGACCATGGTAG
• Tissue: pods
• Gene name: LI_gene_135151;
• Additional information: details;

Expression of Ll_transcript_471122

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0.3
• PS2: 0.3
• PS3: 0.3
• PW1: 0.1
• PW2: 0.1
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_471122

• Blastp: Probable inactive shikimate kinase like 2, chloroplastic from Arabidopsis with 62.4% of identity
• Blastx: Probable inactive shikimate kinase like 2, chloroplastic from Arabidopsis with 62.5% of identity
• Eggnog: Shikimate kinase(ENOG410XSXA)
• Kegg: Link to kegg annotations (AT2G35500)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450710.1)
• Pfam: CS domain (PF04969.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;