Ll_transcript_471132

• Id Trinity: TRINITY_DN42888_c0_g1_i2
• Name Transcript: Ll_transcript_471132
• Sequence: CAATAATTTGTATTAGCCCACATTGGTAGATAAAATCATACCCTCCCTATACTCAAAAAACCAATCCATTACCCACTGAAATTGTAGTTATGGAGCTTCT AAAAACTAAACAACTTCATAACCTTCTGACACCACTTTTGGTACTGTTATTTGCAAGTTTAAGTTTCTCTTTTCCTACGGAGCCTAAAGGTAACAGAAAA TGGCACATGACTTCAGATATTAAGGAAGTAGCAGACAAAGCTTATGACTACATTGTAGTTGGAGGAGGCACATGTGGTTGTCCATTGGCTGCAACCTTAT CAAGGAAATTCTCTGTGCTTTTGATAGAAAGAGGTGGTTCACCATATGGAAATCCCTTAATAATAAATAAAAGATACTATGGTTTTCCATTAGTTGAAAC AGATAGGTATATGTCAGTAGCACAAAGTTTTATCTCACAGGAAGGGGTTAGAAATGTTAGAGGAAGAGTTCTTGGTGGTTCATCAGCTATAAATGGAGGA TTTTATAGTAGAGCAAGTGAGGAATTTGTTACCAAAGTTGGTTGGGATAAGGAACTAGTGAAAGAAAGTTATGAGTGGGTGGAATCTAAGGTTGTTTTTT CACCTTGGTTTCTCACACCATGGCAATCTGTTGCTGAATTCAGCCTCCTTGAAGCAGGTTTTTTACCATATAATGGGTTTAGTTTGGAACATATGAAAGG GACTAAGATTTCTGGTAGTGTGTTTGATGAATTTGGAAAGAGACACACTGCAGCTGATCTTTTACATGAAGGGAACCCAAACACTCTCACAGTCCTTGTG AATGCCACAGTAAAGAGTATCATCTTCCATCACAATGGTAAGAAGAATGAGACTAGAGCTAAGGGTATAAGGTTCATCCAAAGCAATGGTATCTTAGATG AAACTCATGAAGCCTACATAAGAAAGCCCAAGAATTCAACTTCAAGGGGTGATGTCATACTAGCAGCAGGTGCATTAGGAAGCCCCCAAATTCTGTTGCT GAGTGGCATAGGACCAAAGGAACAATTGAAGAAGTTCAACATTCCACTAGTGCTTGATATGAAAGAGGTTGGGCAAGGAATGCAAGACAATCCTTGCATA GCAGTGTTGGTAGATTCCAAGCCACAGAATAGAGTACCTGATCCACCACAAGTTGTTGGCATAACAGATGACTTAAAAATCATAGTGGAATCATCAATTC TGCCCCAAAATTTCAATGCAACAAGGGTTAACTTTGCTGCCAAGTTAGCAATGCCTTCTTCAAAAGGGATGCTTGAACTGAACAACACAGATCCCAGGTT AAACCCTTCTGTGAAATTCAACTATCTAGCAAGTGAAAATGATATGGTAGAATGTGTCAAGATGACAAAACTACTTGACAGAATTGCAAGGTCCAAGTCT GTTGCACTTTTCCTTGGTGAGTCAAGGCAAAATAAGTTGACATCTTTTGAGAATGACCTGAGAAATTTTTGCAAGAAAAATGTAAGAACTATCTATCATT ATCATGGGGGGTGCAGAGTTGGATCAGTTGTTGATAAGCACTACAAGGTTTTTAATGTGAAGGGATTGAGGATATTGGATGGCTCAACTTTTTCTGAGTC ACCAGGCACAAATCCAATGGCTACACTGCTGATGCTAGGAAGATACCAAGGAATCAAGATTCTCAGAGAAAGGGAAGCAAATTATGATTCAAATGTTAAA GAAAACCCATGATACCAGTTATGCAAATTCAGTTTGTAAAAAAATAAGCCAAAGCCAAGCATTTAGGTGGCTATGACAAAGTACTTTTGACTTCAGATTG AGAATCACATTCAACTTTTTCATATAAAAAGTCATTTCACTATTCTCTTATTCAAATTCCTTAGATTAACCTTGAACAAGAAAACATTAATAAATGTTTC CATATTGTTTAATCATACAAGTAATAACATGTACCATTATAAAGAATAAGGAAA
• Tissue: pods
• Gene name: LI_gene_135227;
• Additional information: details;

Expression of Ll_transcript_471132

FPKM

• PAB: 0.2
• PNAB: 2.8
• PS1: 4
• PS2: 0.9
• PS3: 3.4
• PW1: 6.5
• PW2: 6.2
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_471132

• Blastp: Protein HOTHEAD from Arabidopsis with 43.35% of identity
• Blastx: Protein HOTHEAD from Arabidopsis with 43.35% of identity
• Eggnog: oxidoreductase(COG2303)
• Kegg: Link to kegg annotations (AT1G72970)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455707.1)
• Pfam: GMC oxidoreductase (PF00732.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;