| Id Trinity | TRINITY_DN42888_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_471133 |
| Sequence | CAATAATTTGTATTAGCCCACATTGGTAGATAAAATCATACCCTCCCTATACTCAAAAAACCAATCCATTACCCACTGAAATTGTAGTTATGGAGCTTCT AAAAACTAAACAACTTCATAACCTTCTGACACCACTTTTGGTACTGTTATTTGCAAGTTTAAGTTTCTCTTTTCCTACGGAGCCTAAAGGTAACAGAAAA TGGCACATGACTTCAGATATTAAGGAAGTAGCAGACAAAGCTTATGACTACATTGTAGTTGGAGGAGGCACATGTGGTTGTCCATTGGCTGCAACCTTAT CAAGGAAATTCTCTGTGCTTTTGATAGAAAGAGGTGGTTCACCATATGGAAATCCCTTAATAATAAATAAAAGATACTATGGTTTTCCATTAGTTGAAAC AGATAGGTATATGTCAGTAGCACAAAGTTTTATCTCACAGGAAGGGGTTAGAAATGTTAGAGGAAGAGTTCTTGGTGGTTCATCAGCTATAAATGGAGGA TTTTATAGTAGAGCAAGTGAGGAATTTGTTACCAAAGTTGGTTGGGATAAGGAACTAGTGAAAGAAAGTTATGAGTGGGTGGAATCTAAGGTTGTTTTTT CACCTTGGTTTCTCACACCATGGCAATCTGTTGCTGAATTCAGCCTCCTTGAAGCAGGTTTTTTACCATATAATGGGTTTAGTTTGGAACATATGAAAGG GACTAAGATTTCTGGTAGTGTGTTTGATGAATTTGGAAAGAGACACACTGCAGCTGATCTTTTACATGAAGGGAACCCAAACACTCTCACAGTCCTTGTG AATGCCACAGTAAAGAGTATCATCTTCCATCACAATGGTAAGAAATAAATGAGAACTTATTTAGGCATGTTGCATGATTTTGTGCTTATTCAGAAGTTTT TTTGAAAAAGTTATAAAAAACAAGAAATTTATTTTCATAAGTTTCTTTTATAAGCTTATCAAAATAAGCTAAAAAAAACTTTTAAGAAAGCCATAATTTG TTACTACCCTCAGCAAACAAATTTATTAATACAAGAGTTCAAAGGTACTCTAACCCTTGTTAATAATATTGTAGTATGTTCTTAATTCAGTAATGTAATA CTCTCAGAATAAAAAGAATCTATCCTAGATCCTAGTTGATACTAGTAATTTTTACTCATGAATTCAGCATTCAATCTTGACCTTTGATCACTCAAATGCT GTAGGTAAGAAGAATGAGACTAGAGCTAAGGGTATAAGGTTCATCCAAAGCAATGGTATCTTAGATGAAACTCATGAAGCCTACATAAGAAAGCCCAAGA ATTCAACTTCAAGGGGTGATGTCATACTAGCAGCAGGTGCATTAGGAAGCCCCCAAATTCTGTTGCTGAGTGGCATAGGACCAAAGGAACAATTGAAGAA GTTCAACATTCCACTAGTGCTTGATATGAAAGAGGTTGGGCAAGGAATGCAAGACAATCCTTGCATAGCAGTGTTGGTAGATTCCAAGCCACAGAATAGA GTACCTGATCCACCACAAGTTGTTGGCATAACAGATGACTTAAAAATCATAGTGGAATCATCAATTCTGCCCCAAAATTTCAATGCAACAAGGGTTAACT TTGCTGCCAAGTTAGCAATGCCTTCTTCAAAAGGGATGCTTGAACTGAACAACACAGATCCCAGGTTAAACCCTTCTGTGAAATTCAACTATCTAGCAAG TGAAAATGATATGGTAGAATGTGTCAAGATGACAAAACTACTTGACAGAATTGCAAGGTCCAAGTCTGTTGCACTTTTCCTTGGTGAGTCAAGGCAAAAT AAGTTGACATCTTTTGAGAATGACCTGAGAAATTTTTGCAAGAAAAATGTAAGAACTATCTATCATTATCATGGGGGGTGCAGAGTTGGATCAGTTGTTG ATAAGCACTACAAGGTTTTTAATGTGAAGGGATTGAGGATATTGGATGGCTCAACTTTTTCTGAGTCACCAGGCACAAATCCAATGGCTACACTGCTGAT GCTAGGAAGATACCAAGGAATCAAGATTCTCAGAGAAAGGGAAGCAAATTATGATTCAAATGTTAAAGAAAACCCATGATACCAGTTATGCAAATTCAGT TTGTAAAAAAATAAGCCAAAGCCAAGCATTTAGGTGGCTATGACAAAGTACTTTTGACTTCAGATTGAGAATCACATTCAACTTTTTCATATAAAAAGTC ATTTCACTATTCTCTTATTCAAATTCCTTAGATTAACCTTGAACAAGAAAACATTAATAAATGTTTCCATATTGTTTAATCATACAAGTAATAACATGTA CCATTATAAAGAATAAGGAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_135227; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_471133
| Blastp | (R)-mandelonitrile lyase-like from Arabidopsis with 39.66% of identity |
|---|---|
| Blastx | Protein HOTHEAD from Arabidopsis with 53.92% of identity |
| Eggnog | oxidoreductase(COG2303) |
| Kegg | Link to kegg annotations (AT1G73050) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455707.1) |
| Pfam | GMC oxidoreductase (PF05199.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |