Id Trinity | TRINITY_DN42915_c0_g1_i5 |
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Name Transcript | Ll_transcript_334082 |
Sequence | CAAACACTTAAACTCAGACACAAAGGTAAGAGAATTGCACTACACAACTCATCATCTTAGACATGTCTAGTCCTCAGTGTTTTGAGAATCCACCAAACTT GAACTCAGTTATCCATCTAGCAGGCACTACCCAACAATTTGGAGGCCTTAAATCCTATGTTACTGGACCTTCTGATTCCAAATCAGCACTTATCCTTATT TCTGATGTATTTGGGTATGAATCACCAAATCTAAGGAAACTCGCGGACAAAGTGGCTGCAGCTGGATTCTTGGTTGTTGTTCCCGATCTTCTTTATGGTG AATATGTCGATCTTGACAACCCTCAATTTGATCGAGATTCATGGCGTAAGGCACATGCACCGGAAAAGGCAAGTGAAGATACCAAACCTCTAATTGCTGC TCTAAAGAGTAAAGGTGTTACAGCCATAGGGGCTGCAGGGTTCTGCTGGGGAGGGGTTGTGGTTGTGAAATTGGCACTTTCAAGTTCCAGTGATATTCAG GCTGCAGTTATTCTGCATCCTGGACCAGTCACAGATGATGAACTTAACGAGGTTAGTGTTCCTCTAGCAATATTGGGAGCTGAAATTGACACTCATTTCC CACCATCAAAGTTGAAGCAAGTTGAGGAGTTGTTGTCTGCAAAATCAGAGTTTAACAGCTTTGTGAAGATATACCCTGGTGTGAGTCATGGATGGACAGT GAGGTACAATGTTGATGATGAAGCAGCTGTTAAAAGTGCAGAAGAGGCTCATGAGGACATGTTGAATTGGTTTATCAAACATGTCAAGTGAACATTGTTT GCACAACAAAAGATGTCTGTTACTGAAATCAAGTGTGAACAGAAATCTGGTTGTTTAAAGTGATTCAGCTTTGGCTTATGTGTTTAGGATTTGTGATTTT ATCTTCAACATATCATTAAAGAGTTGTTTAAATTTGTATTGTCTTGTATTCATAATTTGTCTTTTTTTACTTCAAATATTTCAGTGATGTGGTGTGTTCA TGACTTAAAATATTGCTCACATAGTCACATATAATATTATGTTGTTTAGTCATACAATTAGATTCATAGCCAAATTACTTTAAAAAGGTCAAAATAGAG BLAST |
Tissue | pods |
Gene name | LI_gene_135273; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_334082
Blastp | Endo-1,3;1,4-beta-D-glucanase from Zea with 44.22% of identity |
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Blastx | Endo-1,3;1,4-beta-D-glucanase from Zea with 43.72% of identity |
Eggnog | dienelactone hydrolase(COG0412) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019439773.1) |
Pfam | Dienelactone hydrolase family (PF01738.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |