Ll_transcript_333997

• Id Trinity: TRINITY_DN42940_c0_g1_i1
• Name Transcript: Ll_transcript_333997
• Sequence: CAAACTAATTACCTCTTTCCCGCATAGCCGCCATTCCAACCGTTCTTCGCCACACTCGCTGCTGCTTTTCATGGCATCCTCACCACTCTCACCACCACCT CATCCTCCACCATTCTAAAAGATCCTCTACACGCATGACCACCCTCCCTACCCAATGACCCTCTCCTTGAGAGCTTCTAGAGCTTTCACTCTCAAATCCC GCTCCATCTTCCCTTTCTCCACTTCAACCCACTCTCCACACCTCCAATACGACGCCGTTTCAGACCACAACGACAATTTCAAAACACCTTCGTTACTTTC TGATCAGTTTCGCGCCGCAGTTGATTACGACGCCGTTTTATTAAACAGTAACAAAAACAAAAACCCTTCTTCGTTAGTCTTTGATCAGTTTCGCTCTGCG GTTACCGAACCGGAGATTCTGGTTCGGGTTCTTAACTCGGTTCGGGACCAGCCCAACCTCGCGCTCCGGTTTTTCCGATGGGCCGAGGCACAACCCGGGT TTAACCGATCTGAATTCGCGTTTGTCGTGATTCTCGAAATTCTCGCGAGAAACGGTTTAATGCGTTCTGCGTATTGGGTAATGGAGAAGGTAATTACGTT GAAAATGGATAACGTTGTTATTGATGTTTTGGTTAATCGTGATGTTTATGTTTCTTCTGATCTTTCGGTTAAGCTTCTTGATTTGTTGCTTTGGATTTTC ACGAAGAAATCAATGCTCGAAAGGTGTTTGGTTGTTTTCTATAGGATGATTCATAATGGTTTTTTGCCTGATGTGAGGAATTGCAATAGGGTTCTTAGGA TGCTTAGGGATAGGAACATGGTTGATAGAGCTAAGGAAGTTTATAATGTGATGGTGGAGTGCGGAGTAAGGCCTACAGTCGTAAGTTATAATACCATGTT GGATTCGTTTTGCAAGGAAGGGGAGGTTGGGCAAGCTTTAGAGCTTTTGTTTGAGATGCATCAGCGAGGGTGTTCGCCCAATGATGTGACTTATAATGTT TTGGTGAATGGTTTGTCTAACAAAGGGGAGTTGAAGCAGGCGAGGGAATTGATTGGAGAGATGTTGAAGTTGGGATTGAAGGTTTCAGCTTACACGTATA ACCCTTTGATTCGTGGGTACTGTGAGGTTGGGATGCTCGAAGAAGCAACGGGTCTTGGGGAGGAGATGTTGAGTAGAGGGGCTTTGCCGACGGTAGTAAC ATACAATACAATTATGTATGGTCTTTGCAAGTGTGGGAGAGTGAGTGATGCTAGGCAGCTTTTATCTGTTATGGCAAATAAGAATATGATGCCGGACTTG GTTTCATATAACACTCTAATTTATGGTTACTGTAGGTTGGGCAACTTGGAGGAGGCTTTTCTCTTATTTGACGAGTTAAGACACAGAAGTATTGTTCCCT CTGTCGTGACCTATAATACGCTTATAGATGGTCTTTGCAGATTGGGGGACTTGGATGTTGCTCGGCAGCTCAAAGATGATATGATCAATAGAGGACCTAG TCCTGATGTATTTACTTTTACAATTCTTGTTAGAGGATCTTGCCAGATGGGAAACTTGCCACTGGCTGAGGAACTATTTGATGAGATGCTTCGTAGAGGG TTGCAGCCTGATCGTTTTGCCTATTCAACTCTAATAGTGGGTGAAATGAAGCTCGGTGACTCATCTAAGGCTTTTGGTATGCAAGAAGAAATGCTAAGCA AAGGTTTTCCTCCTGATTTGATCACTTATAATGTCTTTGTTGATGGGCTCTGCACATTGGGCAATTTGAAAGAAGCAAGTGAACTCGTGCAAAAAATGCT CCGTGTTGGACTTCTTCCGGATCATGTAACATATACTAGCATCATCCATGCTCACTTGATGGCTGGGGATCTTAAGAAGGCCAGAGTGGTGTTTTATGAG ATGTTGAGCAAAGGGATATTTCCTTCAGTTGTCACATACACTGTTTTGATTCATTCTTTTGCAGTTCGGGAGAGGTTGGAGCTTGCTCTTATGTACTTCT TTGAGATGCAAGAGAAAGGTGTTTATCCAAATGTGATCACTTACAATGCTCTAATCAATGGTCTTTGCAAAGCGAGAAAGATGGATCAGGCATACAAATT TTTTATGGAGATGCAAGCAAAGGGTATTTTTGCAAATAAGTATACATACACCATTTTAATTAATGAGAACTGCAACATAGGTCAGTGGCAGGAAGCTTTG AGGTTGTATAAGGATATGCTAGATAGAGAAATCCAGCCTGATTCTTGCACACATAGTGCACTATTCAAGCATCTAAAAAAAGACTATAAATTGCATGCAG TTCAGCATCTTGAAAAATTAATTGGAGGTGGTGAATAAGCTTATGATGCAAAAACAAAGGACTGATTATCTGTTACTTCCATTTTGGTATCCTCACATGA CTAATGACCGAGAGGCATCTCTGCATTCGGATGAGTTTTGACTCATCGAGCCCATACGATCATGTAAAATTTTCTGTTTGTTATGGATGAAGATGCCAAT AATGTTTGTGATTTTAAAGGACAAGAGATGAAGATGCCAATAATGTTTGTGATTTTAAAGGACAAGAGATGAAGATGCAATGTCACTTTTTCACATGCTA TATATATACCCTTCGACTAGGTAATACTTGGAAAGAGTATTTAGATTTATCAATTAAGATTCAAAGATCTGTGACATTATGCTTCAAAGGCAAGAGGTAT AAAGATGAAGCTCAACCTCCTAGCAAGATATTTGAAATAAAATTTTGACAGTCATACACCATTTTTTTCATTCATTGTTCTTAGTCTTTTGTGGGAAGAG GGAATTTTTTGATGGGGTGGTGCTTATTCTTTGCACCATACTTGTTATTATTTCTACGGCTAGTGGTACATTTTTTTTATTTTCCACCACAACTTGTAAA ATGATTGGAAAATAAAAGTTCAACCTCTTCTATGCTAGGCACTGACAGAATAAATGTGAAACAATTTTCTCAGCATTTTAGTCTAGTTTGCTATTCACTT ACATGTTTCAATTGTATACTTATTTTTATGCGTTATATATGCCATTGTTGCACCCTCTGTATCTCTTTTTAAGTAGTTGATGTCAATAGAGTGTAATATC TATACCGTCAATGTATATATAAGATTTAT
• Tissue: pods
• Gene name: LI_gene_135310;
• Additional information: details;

Expression of Ll_transcript_333997

FPKM

• PAB: 2.1
• PNAB: 2.4
• PS1: 1.8
• PS2: 1.7
• PS3: 1.7
• PW1: 1.7
• PW2: 1.9
• PW3: 1.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_333997

• Blastp: Pentatricopeptide repeat-containing protein At1g22960, mitochondrial from Arabidopsis with 47% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g22960, mitochondrial from Arabidopsis with 48.46% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G22960)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437619.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;