Ll_transcript_333998

Id TrinityTRINITY_DN42940_c0_g1_i2
Name TranscriptLl_transcript_333998
SequenceCAAACTAATTACCTCTTTCCCGCATAGCCGCCATTCCAACCGTTCTTCGCCACACTCGCTGCTGCTTTTCATGGCATCCTCACCACTCTCACCACCACCT CATCCTCCACCATTCTAAAAGATCCTCTACACGCATGACCACCCTCCCTACCCAATGACCCTCTCCTTGAGAGCTTCTAGAGCTTTCACTCTCAAATCCC GCTCCATCTTCCCTTTCTCCACTTCAACCCACTCTCCACACCTCCAATACGACGCCGTTTCAGACCACAACGACAATTTCAAAACACCTTCGTTACTTTC TGATCAGTTTCGCGCCGCAGTTGATTACGACGCCGTTTTATTAAACAGTAACAAAAACAAAAACCCTTCTTCGTTAGTCTTTGATCAGTTTCGCTCTGCG GTTACCGAACCGGAGATTCTGGTTCGGGTTCTTAACTCGGTTCGGGACCAGCCCAACCTCGCGCTCCGGTTTTTCCGATGGGCCGAGGCACAACCCGGGT TTAACCGATCTGAATTCGCGTTTGTCGTGATTCTCGAAATTCTCGCGAGAAACGGTTTAATGCGTTCTGCGTATTGGGTAATGGAGAAGGTAATTACGTT GAAAATGGATAACGTTGTTATTGATGTTTTGGTTAATCGTGATGTTTATGTTTCTTCTGATCTTTCGGTTAAGCTTCTTGATTTGTTGCTTTGGATTTTC ACGAAGAAATCAATGCTCGAAAGGTGTTTGGTTGTTTTCTATAGGATGATTCATAATGGTTTTTTGCCTGATGTGAGGAATTGCAATAGGGTTCTTAGGA TGCTTAGGGATAGGAACATGGTTGATAGAGCTAAGGAAGTTTATAATGTGATGGTGGAGTGCGGAGTAAGGCCTACAGTCGTAAGTTATAATACCATGTT GGATTCGTTTTGCAAGGAAGGGGAGGTTGGGCAAGCTTTAGAGCTTTTGTTTGAGATGCATCAGCGAGGGTGTTCGCCCAATGATGTGACTTATAATGTT TTGGTGAATGGTTTGTCTAACAAAGGGGAGTTGAAGCAGGCGAGGGAATTGATTGGAGAGATGTTGAAGTTGGGATTGAAGGTTTCAGCTTACACGTATA ACCCTTTGATTCGTGGGTACTGTGAGGTTGGGATGCTCGAAGAAGCAACGGGTCTTGGGGAGGAGATGTTGAGTAGAGGGGCTTTGCCGACGGTAGTAAC ATACAATACAATTATGTATGGTCTTTGCAAGTGTGGGAGAGTGAGTGATGCTAGGCAGCTTTTATCTGTTATGGCAAATAAGAATATGATGCCGGACTTG GTTTCATATAACACTCTAATTTATGGTTACTGTAGGTTGGGCAACTTGGAGGAGGCTTTTCTCTTATTTGACGAGTTAAGACACAGAAGTATTGTTCCCT CTGTCGTGACCTATAATACGCTTATAGATGGTCTTTGCAGATTGGGGGACTTGGATGTTGCTCGGCAGCTCAAAGATGATATGATCAATAGAGGACCTAG TCCTGATGTATTTACTTTTACAATTCTTGTTAGAGGATCTTGCCAGATGGGAAACTTGCCACTGGCTGAGGAACTATTTGATGAGATGCTTCGTAGAGGG TTGCAGCCTGATCGTTTTGCCTATTCAACTCTAATAGTGGGTGAAATGAAGCTCGGTGACTCATCTAAGGCTTTTGGTATGCAAGAAGAAATGCTAAGCA AAGGTTTTCCTCCTGATTTGATCACTTATAATGTCTTTGTTGATGGGCTCTGCACATTGGGCAATTTGAAAGAAGCAAGTGAACTCGTGCAAAAAATGCT CCGTGTTGGACTTCTTCCGGATCATGTAACATATACTAGCATCATCCATGCTCACTTGATGGCTGGGGATCTTAAGAAGGCCAGAGTGGTGTTTTATGAG ATGTTGAGCAAAGGGATATTTCCTTCAGTTGTCACATACACTGTTTTGATTCATTCTTTTGCAGTTCGGGAGAGGTTGGAGCTTGCTCTTATGTACTTCT TTGAGATGCAAGAGAAAGGTGTTTATCCAAATGTGATCACTTACAATGCTCTAATCAATGGTCTTTGCAAAGCGAGAAAGATGGATCAGGCATACAAATT TTTTATGGAGATGCAAGCAAAGGGTATTTTTGCAAATAAGTATACATACACCATTTTAATTAATGAGAACTGCAACATAGGTCAGTGGCAGGAAGCTTTG AGGTTGTATAAGGATATGCTAGATAGAGAAATCCAGCCTGATTCTTGCACACATAGTGCACTATTCAAGCATCTAAAAAAAGACTATAAATTGCATGCAG TTCAGCATCTTGAAAAATTAATTGGAGGTGGTGAATAAGCTTATGATGCAAAAACAAAGGACTGATTATCTGTTACTTCCATTTTGGTATCCTCACATGA CTAATGACCGAGAGGCATCTCTGCATTCGGATGAGTTTTGACTCATCGAGCCCATACGATCATGTAAAATTTTCTGTTTGTTATGGATGAAGATGCCAAT AATGTTTGTGATTTTAAAGGACAAGAGATGAAGATGCAATGTCACTTTTTCACATGCTATATATATACCCTTCGACTAGGTAATACTTGGAAAGAGTATT TAGATTTATCAATTAAGATTCAAAGATCTGTGACATTATGCTTCAAAGGCAAGAGGTATAAAGATGAAGCTCAACCTCCTAGCAAGATATTTGAAATAAA ATTTTGACAGTCATACACCATTTTTTTCATTCATTGTTCTTAGTCTTTTGTGGGAAGAGGGAATTTTTTGATGGGGTGGTGCTTATTCTTTGCACCATAC TTGTTATTATTTCTACGGCTAGTGGTACATTTTTTTTATTTTCCACCACAACTTGTAAAATGATTGGAAAATAAAAGTTCAACCTCTTCTATGCTAGGCA CTGACAGAATAAATGTGAAACAATTTTCTCAGCATTTTAGTCTAGTTTGCTATTCACTTACATGTTTCAATTGTATACTTATTTTTATGCGTTATATATG CCATTGTTGCACCCTCTGTATCTCTTTTTAAGTAGTTGATGTCAATAGAGTGTAATATCTATACCGTCAATGTATATATAAGATTTAT BLAST
Tissuepods
Gene nameLI_gene_135310; 
Additional informationdetails; 

Expression of Ll_transcript_333998

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_333998
BlastpPentatricopeptide repeat-containing protein At1g22960, mitochondrial from Arabidopsis with 47% of identity
BlastxPentatricopeptide repeat-containing protein At1g22960, mitochondrial from Arabidopsis with 48.46% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT1G22960)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019437619.1)
PfamPentatricopeptide repeat domain (PF13812.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;