| Id Trinity | TRINITY_DN42950_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_334045 |
| Sequence | ATTAGCTGTGTAATTAATAGATAATGTGGAAGTAACGGAAATTGAAGTGGTAGATAGACATCGCATGAGATCACATTGTTGGACAACGACGACGACGATA GTTGTATGCAAAAAAGCACAACTCACAGTGACCTAGTCCCCATAATTAGGGTTATAAAAACTCCAAATCCACAATTGAAGCTTTCAACTAAATATGAATT CTAACGAATCACCAAAGGATCCGATTCCACTTGATAATCGACCCGGCATCTTCATCATCGGATCTCCCAACGTTGGTAAACGTACCCTCTTATCTCGATT GCTCTCTATTGATCTTGAAGATGCTTCTGATTCGGCATCTGAAGTAAATGTCCATGGGTGGAATATCAGCACTAAGTACTATACTGCCGATGTTTCTGTG TGGACGGCTAATCTTCATGACGACTTTTCTGTTAGGAGTCTGCCTATATTTCAACAATTGGATGCTTTAGTGATGGTTTTCGACATGAACGATCTATCTT CCTTAACTGCACTTCAAAATTGGGTATCTTGCATTGATATTCAAAACTTTGAGATATTATTATGCATTGGAAACAAAGTGGATCTGATTCCAGGCCATCC AGTTCATGCTGAATACAGAAGACGATCGATGAAGCTTGAAGATTCTGCTGTCGATCCTTATTCAGAGTTCGCTAAGTATGGAATATCGGAGTCTGAGGGA ACTAGTTTATTGGGAGATGAAGAACCATCAGGGGATATCAGAAGGTCCTGTTTGGAATGGTGCACAGAGAATAACATTGAGTTCATTGAGGCATGTGCTT CCAATGCTGATTTTGACAAATGCTTGTCTGTAGACGGTGACTTACAAGGAATTGAGCGGCTCTATGGTGCTCTCTCTGCTCACATGTGGCCTGGAATGAT ATTAAAATCTGGTGATAGAATAAGTGAGCCATCATTGCCTGAGAAAGAAGGTCGTTTTCTTCCCTCGGTTTTTCATTCTATGGTGCATTCTGCTATTAGT AGTTTTGAATAAAAGCTAAGCACTAACTTTGGTTTATCTTAATTTATGCAGAGTCTTCAGATGAATCGGATTTTGAATTGGAGTATGAAGTTTTATCAGC CGGTTCAGCTGATCTATGGGATGATACAGAACAGGGATGGGTTTCTGCACCTTCTTTAGATGCCGGAGGATCAATTCCTCATAACAACCCCAACACAGAA TGTAAACCTGAGGATGGAACTAAATCTGATAAAGAGCTCCAGACCTCAACCTCAGGCACTGCATTTCAGGATGAGAGTGACAAGGAAGTAGTACCCAGTA TCAATGATTGTGAAGATGAGAAGCCCGATATGGGTAAAATTCTTGACTTTGATGATTTGGAACAGATGATGTCTGAGATTGGAAATATGCGTTCAAGCTT AAGATTGATGCCTGATTTTCAGAGGAGGGAAATGGCTGCAAAGCTGGCAATGAAAATGGCTGCCGTATTTGGGGGGGGGAGTGATGGTGAAGAGGAAATT GAGTCCATATAAGTGTGAGCTCTACCAGATTCAGTTATAATGTTCAAATAGTTGGTGAATGTCGTTGTTACGAGCCAGCACTTAGAAGGAGGGAGCAACT TCCCCTGCTCTAGGATCAGTGTTTTTCTTCATGCTTTTGTTATGCCCTACTTGGTCGCTGCAGAAAACCTGAACACGTTTAAGATCAATTTTGGTTCTTA CTAAGATGCCAAAATTATGTGCTAGTGTAATATTTTAGTGTACTTGGTTGGAAAAGAACACTAGAATTTTCATGGACTCATTTTTGTCTTTAGATTTCCT TTGAGATTGGGTCATTCTTTTGGTATCCCTTTGGTATTCTATACACTTGGGCTTTTAATTGATACTTTTTTTGATAGACATGGAGATGTGCTAATATGCT GTATTGGATGATTCAATCACTTAATTCTAGGTACTTATTTCTTCTAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_135326; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_334045
| Blastp | Ras-related protein Rab-12 from Rattus with 22.73% of identity |
|---|---|
| Blastx | - |
| Eggnog | member RAS oncogene family(ENOG410XPUI) |
| Kegg | Link to kegg annotations (25530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019445153.1) |
| Pfam | Ras family (PF00071.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |