Id Trinity | TRINITY_DN42977_c0_g1_i2 |
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Name Transcript | Ll_transcript_333809 |
Sequence | AGAACACGTATCCTTATCCTCACCTAGTTCAGTTGTTTCACAAAGAAAGTGGGTAATGGCGTCTACCTCTGCTTCCGCCATTCCTCTATGCTTTCCTTCA TCTCAAAAACACCCCAGAAAAGGAAAAGGAACACTGCATCTTCATGTTGTTAAATCAATTCAACAAAATGACACCACGCCCATTCCATCAAAGGAACTTC CGGTAACAGTTTCCAGGCGTCACTGCCTCACAATTTTGCCTTCAACTCTAGCTCTATTAACTGCTTCCGCGACACCTATTTTGGTTCCAAAGGCCAATGC TGCTGATGCAATGGAAAAACCCGTGTGCCGAAATTGCCAGGGAAGTGGTGCTGTGCTATGTGATATGTGTGGTGGTACAGGAAAATGGAAGGCCCTGAAC AGGAAGCGAGCAAAAGATGTTTATGAGTTTACAGAATGTCCAAATTGTTATGGTCGGGGAAAGCTTGTCTGCCCAGTTTGTTTAGGAACCGGTTTACCGA ACAACAAAGGTTTGCTAAGGAGGCCTGATGCAAAGAAACTGCTTGATAAGATGTACAACGGGCGGCTACTTCCAAACTCTTAGAAGTTGTTTGTTTGAAC ACAACAATGGCTTGCCAATGCTGCATTGTGGCACAATGGCTAGAAGGAACATTCTCCATTTAGTTAACACAGCTAGTGACTGCATTGGTAATCAACTCCT AGTACAGAATATGCAAGATTTGTTGCTTATATATTTTTGCTCATGGGTTCAACCATTCCCTGGACCTGCTCATAGTGAAAGTTTTGTAACACTTGGTTGA GGCATTGCAGAAAGATAGTAACCATTGCTTGGTTATTACTTTCTTGGTTCTCTATGCAAAATGTCCAATTTTCAATGCTACAATAATAGAATATTCATGC AGATCCTTTAGATTTCCAGAATGTCTTGTATATTGTAGACATTGTGCAAATACATCCAGCAAGAGTAGCTACACAAGCTTCTTTTAATTTCAAAACAACA AAAATTTCCAAAGGGTTGAAAAGATATTCTTTTAATTTTTTGAACATTCTTATCATAACATGTTTTTTGTAAGGATTCTCTGTGTCTTTGTATAAATATT CTTAAAAGTTTT BLAST |
Tissue | pods |
Gene name | LI_gene_135362; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_333809
Blastp | Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic from Oryza sativa with 75.57% of identity |
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Blastx | Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic from Zea with 83.5% of identity |
Eggnog | NA(ENOG4111XYA) |
Kegg | Link to kegg annotations (4345779) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019427516.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |