| Id Trinity | TRINITY_DN42977_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_333811 |
| Sequence | AGAACACGTATCCTTATCCTCACCTAGTTCAGTTGTTTCACAAAGAAAGTGGGTAATGGCGTCTACCTCTGCTTCCGCCATTCCTCTATGCTTTCCTTCA TCTCAAAAACACCCCAGAAAAGGAAAAGGAACACTGCATCTTCATGTTGTTAAATCAATTCAACAAAATGACACCACGCCCATTCCATCAAAGGTTACTT ACAATATCATCCATTATTTTGATTTTTGAGTACTATCCATTCATATTACAAATAAACACTGCTCATTTTTGTTAATGTTAATTGTTCATAAAGTAATCAT TTTTCTCTATTTCATCTATTGCATTGACTGTTTATGCTGTATCATGTGATAAGTTATGAATAATCACTTTCTTATTTTTGTCCCTTGATTTTCTTGTAAA TCAACAATGTTATGCTCCAAAGTCCAAACCAATGTTATATATGAACAGTAACTCTTTTAGACTTAATCTTGGAGTAAATTGATCCTCACTCTTTCTTTTA TATTATTTAACAAAATTTAACTAACTACACAACTATTAATTTTAAATGCGGTCTAACTACTTGGAGGGATTTTTCTAAAATAGAGACTAAGTTGTGTAAT GAAGCATGCTGTCGTGCCCCGATTTTCAGTTACGAGCCATGGGTATCATTATTTGACTAATGATCGAGTTAGTAAGCATATGTCATTTGACTGAAAGTAG TTAATGCAAAGATTTGGGCTCTGATCGAGCTAAATGAATCCAATAAGTGAATACGAGTTGTCAATAAAAAAAGTTAATCCTTTCATTCAATGCAGGAACT TCCGGTAACAGTTTCCAGGCGTCACTGCCTCACAATTTTGCCTTCAACTCTAGCTCTATTAACTGCTTCCGCGACACCTATTTTGGTTCCAAAGGCCAAT GCTGCTGATGCAATGGAAAAACCCGTGTGCCGAAATTGCCAGGGAAGTGGTGCTGTGCTATGTAAGTTATCCATGATGAATTCCATTGAACAGTATTCTT CTAAACAGAGAAATGAAATTTCCATAATTTTAAAAAGTCATAGAAACTTGTTTCTTGAAGAGGCATAACCTTGTTGCAACTCTACAATGACCTAGAAAAT CATAAGCAATTCAGAATAACCGAGACAATTTGAAATCTCGGTTAAGGTTGCATCTCAAAAGTCAAAATCAATTGGTGATAAGAGGAGTAACTCAATACGT ATTTAAATGACCCCAAGAGAATAAGGTAGGCAATGTGGGGCTTACTTCCCAACATGCCCCACCACAAAGGCCTGCCAAACCACACAATGATGTGTTACCT TTGACCTATGACGAAAATACATCTTTTTGGCCCATGGCAATCGGAGAGGAGTTGTGTTTGGCTCTGATATCGTGTTAAGGTTTTATCTCAAAACCAATTG CTACGAGAGGAGATGTCCAACAAGTATTTCAATCATATCCAAGAGTGAGATATGCAATGTGAGACTTATTCTAAACTATGCTCAAGTTGAAGAATATTTA ATTAAGTTAAGTTGAAGAATATCTAATAAAGTAACCAAGTTGCTAAATATAATGTGATTGATTAATGAGTCAGTAAAGGGTATTTCTCTATAATTCCTGG GATCATATGTGATACACTTTATCAATGTTGTGAGTTTTCTTGAGTATTTAGGAACAGTCAATTGCAACCACAGTTTTTGAACATGCTTTGATCCATTAGA CGTTTACTTTTCATTTAGGTGATATGTGTGGTGGTACAGGAAAATGGAAGGCCCTGAACAGGAAGCGAGCAAAAGATGTTTATGAGTTTACAGAATGTCC AAATTGTTATGGTACAGAGTCCAGTTTCTACTTGATTCCTTCATTTTTGTTAGTTATAGGAGGTAATGGTAATATAATGATCTGATTTGAACTTTTCAAG TATTTTCAGAAATTGCTGTTAATTTCCTTTGATATGTCGATGACCTTCGAGTCAATAAAGTAGAGTGAGCTGCCCCCTCTTCCCTAAGGATATGTTTGAA TCTGTGGCAAGAGATGGAACAGTCTTAGATACCATTGTTTGGCTTTTAAGAATTAGGATGGAGTGACACTCATTCCATCTCACTCCATCCCGATTCCAAT AATTCCATTCTACTGGAACTTCCAAAAAACATAATCGGAACTTTAACAGTATGATAACATTGTCATTCCACCACTGGAAGTTACCAGAAACTGAAGTCTT TCAAACAAGTGTTTGGGTCAATTTTCTCTCCTATTGCTGTGCTTTAACTTATCCGAACTTAACATTATTTTGTAGCATTGCCATAAGCAACTAACCTATG TGATTGTTCATTGATTAATAATATTTGTAAACTACAGGTCGGGGAAAGCTTGTCTGCCCAGTTTGTTTAGGAACCGGTTTACCGAACAACAAAGGTTTGC TAAGGAGGCCTGATGCAAAGAAACTGCTTGATAAGATGTACAACGGGCGGCTACTTCCAAACTCTTAGAAGTTGTTTGTTTGAACACAACAATGGCTTGC CAATGCTGCATTGTGGCACAATGGCTAGAAGGAACATTCTCCATTTAGTTAACACAGCTAGTGACTGCATTGGTAATCAACTCCTAGTACAGAATATGCA AGATTTGTTGCTTATATATTTTTGCTCATGGGTTCAACCATTCCCTGGACCTGCTCATAGTGAAAGTTTTGTAACACTTGGTTGAGGCATTGCAGAAAGA TAGTAACCATTGCTTGGTTATTACTTTCTTGGTTCTCTATGCAAAATGTCCAATTTTCAATGCTACAATAATAGAATATTCATGCAGATCCTTTAGATTT CCAGAATGTCTTGTATATTGTAGACATTGTGCAAATACATCCAGCAAGAGTAGCTACACAAGCTTCTTTTAATTTCAAAACAACAAAAATTTCCAAAGGG TTGAAAAGATATTCTTTTAATTTTTTGAACATTCTTATCATAACATGTTTTTTGTAAGGATTCTCTGTGTCTTTGTATAAATATTCTTAAAAGTTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_135362; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_333811
| Blastp | - |
|---|---|
| Blastx | Protein PHOTOSYSTEM I ASSEMBLY 2, chloroplastic from Oryza sativa with 93.02% of identity |
| Eggnog | NA(ENOG4111XYA) |
| Kegg | Link to kegg annotations (4345779) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427516.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |