Ll_transcript_523903

• Id Trinity: TRINITY_DN43040_c0_g1_i1
• Name Transcript: Ll_transcript_523903
• Sequence: TGTCATCATTCGATAAGTCTCATCACACACTTTATTAGACTCTCTCAGACTTTCCTATAACTCTATCCAACACTTATCATTCCCATTTCCATTATACATT ACACCGCAAAACATGGCCGGCGAAGTCCCCGCCGGTAACCACTCACCGGAGGAGATTCTTTCTCTCATTCACGACATAGCCGGAATGTGCTCCGGCGATT CATCCACTGCCGATGCCATTGCCGGTGATGCCATGTTCAGGAAAGACTGCACCGATCTGGTTCGCCGGATCTCACTCCTCACCTACTTGTTCGAGGAGAT TAACGAATTGACGAAGGTTGTTGATTCTGCTGCTACTTCTTCTACCACTACTGATACTGGTGATTCTGATTCGTGGTCCTCTGATCTGGTTCTTGCTCTT CACTCTGCGAAACGCTTGCTTTCAATAGCTAGGAACTTTCGTTCCAATTGCTCTTCTGTCAGTATCTCTCGATCTAACATTTTTCTTATTTTCGAATTCC AGCTTCAACTTTGTTAAGTACGTGTTTGATGTTCATAATTGGGTTTCTCTGTAATTTAGATCTGTAGTTTGTAAACTACTCTCTGAAATTGCTAAACTTT GATTTTGTTATTTTCATTATTTATTTTGGTAAATACGTTATAAAATTCCAAATTTGCCATTAGATGTTCTTATTTATCTGTCATTACTGAGAAAACACCC AGATTTAAGCAACATAATAAGTGCATTCATATGTATTAAATTACCGTGTTTTTACTTAGCCTGCCCTTATTTCTCACTGTTAATCTCTCTAATTTAACAT ATCCAAAATGATGGTAAAAGTGGAAACTAGTAATTAATATTTTAACTTCTATTGGGAAAAATAAATTCTTTAAATACTAACAGATGGGGTAGCTTTTTAT GGGATAGGGCTGTGATTTTATTTTTCTACTAATATACATGATTGAAGTCAGGTAGTTCTATCTCTCTCTAAGTGGTGTAGTCGGTGTTCAGCCGGAAAAT GAGTCGCGACAATTATAACGTAGCTTCTATATGTAACTCCAATTTGAGCATGCCAAGATTTAATTTTGGGATAATGTTTTAGCTATTGCTCGATTCAGAG GGGTTGCACTTTCACGTTAAATCGTGTTTTTTAGCAACTAAAATGTTGTGCAGATGGGTATGATATGTGCAACCAAAATCTACTAAGATGATATCCTGTT TTGTTAGGGGAAGCAATATCTTCCATACATAGGTTACTCATGGCCTGCACATGTTCAATATATTGTATCCTTGACGAAAATTGTTCCTTTTTTTGGCATT TTGTATGTTGTTCTTTGATTTATTTACTTCATTCAAGAAATATTCTTCAAGTGGAGATTTTTAAACCTCGCTAATTATTCAACTTGTAATCTTACCCATG CTAAATTTTGGTGGGCATGTATATCTTAAGACTGTAAAAGCATGTCTGTGTACATCTCTGAATTTTGATATATCTTGATTTAAGGATGGAGCTGCCAAGG CCATTACCTTTCAATTTCAGAGTGTGACATGGAAATTGGAAAAACTATTAAGCAACTTACCATATGGCAATTTGGATATCTCAGAGGAAGTCAGAGAACA GGTGGACTTGGTTAGAGCACAATTTAGACGAGCCACAGATAAATATGGGTTTATGATTTCAAGAATGCCATCTCATGAATTATCCCAGCCGATGGATCAA GAGATTACTCAGGTTCTTGGCAAATCTGTGAATGGATTGCATAAACAACACAGCTGTCCTGAAAAACTATCAGAGTTGAATAGCATTCCTAAAAACATTG GTGGGAAAGGCTGCAATACGTTTCGGGCATTTTCTCTCTTGGAAAGATCAAGGAGCATCCCTGTTTGCACTGATGTTTCTTCATCAAATGTTACTGATTC TGAAAGTCAAGAAAAATCTGAGAGCAAAAGTCTATCCGGAGTTAAAAAACCAGAAGCAGCAGTAATCCCTGAAGATTTTCTTTGCCCAATATCCCTGGAA CTAATGAGAGATCCTGTTATTGTGGCTACCGGCCAGACATATGAGAGATCTTACATACAGAGGTGGATAGATTGTGGAAATACAACGTGTCCAAAAACTC AGCAGAAGCTCCAACATTTGACCCTTACTCCAAATTATGTGTTAAGGAGCCTTATTAGTCAGTGGTGTATAGAGAACAATATTGAGCAGCCGACAGGACT AACTAATGGTAAAATGAAAAAGAGCGATGGATCGTTCAGAGATGTTACAGGTGACATAGAAGCAATTGAAGCTTTGGTCCGGAAGCTCTCGAGCCGGTCC ATTGAGGAGCGTAGAGCAGCTGTTACTGAAATTCGATCACTGTCCAAACGAAGCACGGACAACAGGATACTAATTGCTGAAGCTGGAGCAATTCCGGTTC TAGTCAACCTTTTAACATCAGAAGATGTATTGACACAAGACAATGCAGTTACTTCCATTCTCAACCTTTCTATATATGAAAGTAACAAGGGACTTATAAT GCTTGCTGGTGCCATTCCATCCATTGTCCAAGTCCTGAGAGCTGGAACCATGGAAGCGAGGGAAAACGCAGCAGCAACCCTCTTTAGCTTGTCTCTTGCA GATGAGAATAAGATAATAATTGGTGCTTCAGGAGCTATACCCGCATTGGTAGAATTGCTCCAAAATGGGAGCTCTAGAGGGAAGAAAGATGCAGCAACAG CATTGTTCAATTTATGCATTTATCAAGGGAACAAGGGCAGGGCCATAAGAGCAGGGATTATCACCGCATTGTTGAAGATGCTTACAGATTCAAGCCAATC AATGGTTGATGAAGCCCTAACAATAATGTCAGTTCTTGCAAGCCACCAAGAGGCAAAGGTTGCTATAGTAAAAGCCAGCACAATACCAGTTTTAATAGAT CTTTTGAGGACAGGATTGCCTCGCAACAAAGAGAATGCAGTTGCCATTTTACTTGCCTTGTGCAAGAGGGACACCGACAATCTTGCTTGTTTAAGTAGGC TTGGTGCTGTCATACCTCTTTCTGACCTTGCTAGGAGTGGTACGGAGAGGGCCAAACGCAAGGCTACTTCATTATTGGAGCATCTTCGTAAGTTACAGCA GATTTGAAGGGTGTTGTGGTGCAAAGCACTCTTAAGTTCAATATCTTTCTCTCTGATTCTTTGACATAATTTCCCACAGCTTGTTTGGCAAACTGATCAT AGAAGGGTGAAATAAGAAAGTCTGCCTCATTGATTCAGTGTATTTTTTCCTTCTTTTCTTTGTTTGTTCTTTTTTTAACCCCTGTATGAGCGTGTAAAGT AATCAATTCATATATTGTTTTCCCTAGAAATTCTTACAGAAGTTTCTGTTTTCCTCTTCAATTTGTTTGCTCTGTTGAAAAGGTTGTCTGCATGATGACC TTCTGGCTTTTCTGTCCCCTTACCAAAGAAATCACCATTTACAAAGAAACTAAGCAACAAAAGCATACTGCAGTGTTGGTGTGTCAATATGTAATATATT TATCCAGTATCAACATCAATCTTTATTTATGGTCCAAATCAAATCATGAAAGTGGAATATGGAAATAAAAAGAAAAGGAC
• Tissue: pods
• Gene name: LI_gene_135453;
• Additional information: details;

Expression of Ll_transcript_523903

FPKM

• PAB: 0.3
• PNAB: 0.3
• PS1: 0.6
• PS2: 0.4
• PS3: 0.1
• PW1: 0.8
• PW2: 1.8
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_523903

• Blastp: U-box domain-containing protein 10 from Arabidopsis with 74.56% of identity
• Blastx: U-box domain-containing protein 10 from Arabidopsis with 63.93% of identity
• Eggnog: Ubox domain-containing protein(ENOG410YBA5)
• Kegg: Link to kegg annotations (AT1G71020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445814.1)
• Pfam: U-box domain (PF04564.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;