Ll_transcript_523906

• Id Trinity: TRINITY_DN43040_c0_g1_i4
• Name Transcript: Ll_transcript_523906
• Sequence: TGTCATCATTCGATAAGTCTCATCACACACTTTATTAGACTCTCTCAGACTTTCCTATAACTCTATCCAACACTTATCATTCCCATTTCCATTATACATT ACACCGCAAAACATGGCCGGCGAAGTCCCCGCCGGTAACCACTCACCGGAGGAGATTCTTTCTCTCATTCACGACATAGCCGGAATGTGCTCCGGCGATT CATCCACTGCCGATGCCATTGCCGGTGATGCCATGTTCAGGAAAGACTGCACCGATCTGGTTCGCCGGATCTCACTCCTCACCTACTTGTTCGAGGAGAT TAACGAATTGACGAAGGTTGTTGATTCTGCTGCTACTTCTTCTACCACTACTGATACTGGTGATTCTGATTCGTGGTCCTCTGATCTGGTTCTTGCTCTT CACTCTGCGAAACGCTTGCTTTCAATAGCTAGGAACTTTCGTTCCAATTGCTCTTCTGATGGAGCTGCCAAGGCCATTACCTTTCAATTTCAGAGTGTGA CATGGAAATTGGAAAAACTATTAAGCAACTTACCATATGGCAATTTGGATATCTCAGAGGAAGTCAGAGAACAGGTGGACTTGGTTAGAGCACAATTTAG ACGAGCCACAGATAAATATGGGTTTATGATTTCAAGAATGCCATCTCATGAATTATCCCAGCCGATGGATCAAGAGATTACTCAGGTTCTTGGCAAATCT GTGAATGGATTGCATAAACAACACAGCTGTCCTGAAAAACTATCAGAGTTGAATAGCATTCCTAAAAACATTGGTGGGAAAGGCTGCAATACGTTTCGGG CATTTTCTCTCTTGGAAAGATCAAGGAGCATCCCTGTTTGCACTGATGTTTCTTCATCAAATGTTACTGATTCTGAAAGTCAAGAAAAATCTGAGAGCAA AAGTCTATCCGGAGTTAAAAAACCAGAAGCAGCAGTAATCCCTGAAGATTTTCTTTGCCCAATATCCCTGGAACTAATGAGAGATCCTGTTATTGTGGCT ACCGGCCAGACATATGAGAGATCTTACATACAGAGGTGGATAGATTGTGGAAATACAACGTGTCCAAAAACTCAGCAGAAGCTCCAACATTTGACCCTTA CTCCAAATTATGTGTTAAGGAGCCTTATTAGTCAGTGGTGTATAGAGAACAATATTGAGCAGCCGACAGGACTAACTAATGGTAAAATGAAAAAGAGCGA TGGATCGTTCAGAGATGTTACAGGTGACATAGAAGCAATTGAAGCTTTGGTCCGGAAGCTCTCGAGCCGGTCCATTGAGGAGCGTAGAGCAGCTGTTACT GAAATTCGATCACTGTCCAAACGAAGCACGGACAACAGGATACTAATTGCTGAAGCTGGAGCAATTCCGGTTCTAGTCAACCTTTTAACATCAGAAGATG TATTGACACAAGACAATGCAGTTACTTCCATTCTCAACCTTTCTATATATGAAAGTAACAAGGGACTTATAATGCTTGCTGGTGCCATTCCATCCATTGT CCAAGTCCTGAGAGCTGGAACCATGGAAGCGAGGGAAAACGCAGCAGCAACCCTCTTTAGCTTGTCTCTTGCAGATGAGAATAAGATAATAATTGGTGCT TCAGGAGCTATACCCGCATTGGTAGAATTGCTCCAAAATGGGAGCTCTAGAGGGAAGAAAGATGCAGCAACAGCATTGTTCAATTTATGCATTTATCAAG GGAACAAGGGCAGGGCCATAAGAGCAGGGATTATCACCGCATTGTTGAAGATGCTTACAGATTCAAGCCAATCAATGGTTGATGAAGCCCTAACAATAAT GTCAGTTCTTGCAAGCCACCAAGAGGCAAAGGTTGCTATAGTAAAAGCCAGCACAATACCAGTTTTAATAGATCTTTTGAGGACAGGATTGCCTCGCAAC AAAGAGAATGCAGTTGCCATTTTACTTGCCTTGTGCAAGAGGGACACCGACAATCTTGCTTGTTTAAGTAGGCTTGGTGCTGTCATACCTCTTTCTGACC TTGCTAGGAGTGGTACGGAGAGGGCCAAACGCAAGGCTACTTCATTATTGGAGCATCTTCGTAAGTTACAGCAGATTTGAAGGGTGTTGTGGTGCAAAGC ACTCTTAAGTTCAATATCTTTCTCTCTGATTCTTTGACATAATTTCCCACAGCTTGTTTGGCAAACTGATCATAGAAGGGTGAAATAAGAAAGTCTGCCT CATTGATTCAGTGTATTTTTTCCTTCTTTTCTTTGTTTGTTCTTTTTTTAACCCCTGTATGAGCGTGTAAAGTAATCAATTCATATATTGTTTTCCCTAG AAATTCTTACAGAAGTTTCTGTTTTCCTCTTCAATTTGTTTGCTCTGTTGAAAAGGTTGTCTGCATGATGACCTTCTGGCTTTTCTGTCCCCTTACCAAA GAAATCACCATTTACAAAGAAACTAAGCAACAAAAGCATACTGCAGTGTTGGTGTGTCAATATGTAATATATTTATCCAGTATCAACATCAATCTTTATT TATGGTCCAAATCAAATCATGAAAGTGGAATATGGAAATAAAAAGAAAAGGAC
• Tissue: pods
• Gene name: LI_gene_135453;
• Additional information: details;

Expression of Ll_transcript_523906

FPKM

• PAB: 5.6
• PNAB: 12.8
• PS1: 12.1
• PS2: 7.3
• PS3: 11.2
• PW1: 18.7
• PW2: 33.9
• PW3: 20

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_523906

• Blastp: U-box domain-containing protein 10 from Arabidopsis with 61.01% of identity
• Blastx: U-box domain-containing protein 10 from Arabidopsis with 60.24% of identity
• Eggnog: Ubox domain-containing protein(ENOG410YBA5)
• Kegg: Link to kegg annotations (AT1G71020)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445814.1)
• Pfam: U-box domain (PF04564.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;