| Id Trinity | TRINITY_DN43054_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_523946 |
| Sequence | GAAATTATAAAATCGAAAGGTGAATTAATTTATAAAATGGAAAGCGGGTGAGAACAAATTAGCACCAAAATGGCGAAGAAGAAAACAGCGAGTTCCGGTC ACCGGGAACTCAAACGAGTTGACTCAGTTCCCAATCGCAATAAATCCATCATCACTATCATTGCTATAATCATTGCTATAATCATCGCTTATCAGTTCAG ACATTCTTCTTCTTCTTCTTCTGTGTCTCACACATTCGATCCTAATTACCAAAATATCCTCACTGAAAATTCAAGAGTATCACAAAATTCTTCTCATCGC CATTACACTTATCCTGTCCTTGCCTACATTACTCCCTGGTATTCTTTTTTTTACTTTCACGTCTTCTTCTAATTTATTCCTAATATCTATGCATTGTCGA TGTAAAAATTTATACACTGTCACGTCATCGATCATTCATTTGTACTACATTTTCTCAAATTATTTGTTCCAAACAGCTTCTTTAAAATATTTTATACTTT TAAGTTGTTTTTATTTGTGGCGAAAAATCTATATTTTTTGAAAAATTAATAAATGGGTTTTGAGAATATTTTTGTTCTGCCATTGAAAATGCTAATTTTA GTTGATAAGTGAAGAGATTTGAGACATGAGTGGGTAGAATAGTTTTGATAGTTCATTAGGAATGTTGTGCATGAGTAGTAACATTATATTCCTGGCAGAG ATGAATGCATTCCTATGATGTAGTTCCTTACTCTGTAATCTGTATCATTCTTAAAAATGAAACTTGTTGCTGTTACTAGAATCTGGTAGAAACAGAGTAT AGTAAGTAATTGTTTGATCCAATCTTTAATGTTTTCAAAATCTTGTTGAAATTTTTTGCTTTGTTTGTTCCGTCATCGTGATTTTGCTCCTTGTTTTGGT CATTTGTAAAAACCGCTTCAAGTCGTCTACTTTCTGATGTGTGTTCTAACTTCTAACTCCAGTGCATGATTATATTTCTTTATGTTGAAAGTAAAATTCA TTTTTCTTTTCTGTTATGGTGAAATAATTCTGTTTCCCCTTATGTGTCATTCTTTCTGTTGAAGACGTCTTTATATTTATCATGCATGTGTATTTCCAAA TATGTTAAATATGGCAGGAATTCTCGGGGTTATGAAATGGCGAAGACGTTCAACTCTAAGTTTACACATCTGTCGCCCGTCTGGTATGATTTAAAGAGGT ATGTACCTCATTCCTAACTTCTTATTGAAGAATTACAAAAACGGGCAGAGTAAGACCTATCCAATTCGTAATCCTCCAGGTGTGAGTGTGTCAGGCCTTT CAAATTTATTTGGAAGTATACAAAAAGTTCTGTTAGCTTTAGATTGTGGTTTGAGGATCTCCTTGTCATTTTAGGCGAGTTTTTTTATGACCCATTATCA TTTTGTCCTGAGAGATGATTCCCTTTGAGAAATGGGATATCTAGGCTTGGTTTGAATATTTTCTATTCTCATGTATGTGTGTAATTTTTTCATACACTTA AATTAGTTAGTTTTTATTATACTGCTTTGTGGTTTTGCTTCATCAGTTGTTATTGCCAGCCAGCAGACTAGCTTAGTTCTAGAGGGGAGACATAATGCTG ACAAAGGATGGATCTCAGAGCTTAAAAAGAGCGGCGAAGCTTTGATCTTGCCTAGAGTTGTTCTGGAAGCATTCCCAGCAGAGCTGGTAAGAAAGAAGAA ACTAAGGAACAAGGCTATTGACCTTATAGTAACAGAGTGCAAGGAAATGGGATATGATGGTATTGTCTTAGAATCTTGGTCAAGGTGGGCAGCTTATGGT ATATTGCATGATCCAAACATGAGGAATTTGGCACTGCAGTTTGTAAAACAGCTTGGAGAAGCACTGCATTCTATAAGCAGCGAGAGAAACAGTGAGCAGC AATTGCAGTTGGTGTATGTCATAGGTCCACCATCTTCTGAGAAGCTGCAGGCTCATGACTTTGGTCCAAAAGATCTTGAGACTTTAAGTGAAGCTGTGGA TGGATTCTCATTAATGACATATGACTTCTCTAATCCTCATAAACCAGGTCCTAATGCTCCTATGAAATGGATTCAAATTGTTCTACAGCTCCTCCTTGAT ACCTCTGGCAATAGAGCCAAAAGCCTGGCCCCTAAGATACTTCTTGGCATCAACTTCTATGGAAATGATTTCTCCCTTTCAAGTGATTCAGGTGGTGGAG CTATTATTGGAAGAGGTTACCTCACATTATTGGAGAAGCACAAGCCTGAACTACAATGGGATAAGAACAGTGGAGAACACTTTTTCTTGTACACTGATGA CAAGGATATAAAGCATGCAGTGTTCTATCCTTCTTTAAAGTCAATTTCTTTGAGGTTAGAGGAAGCCCTTTCTTGGGGTTGTGGCATCTCCATCTGGGAA ATTGGTCAAGGTTTAGATTATTTTTTTGACCTTCTATGAAAACAATGTGTTGATGTTTTAGATTATTTCTATGCCCCATGTTAATGTTTATCCAAAGTTC CAAACTATATTGAGTTTAACCAAAATGTACTTGCCAACAAATAAATAAATAAAAATGGGTCCTTTTTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_135468; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_523946
| Blastp | Chitinase domain-containing protein 1 from Xenopus with 43.72% of identity |
|---|---|
| Blastx | Chitinase domain-containing protein 1 from Xenopus with 38.98% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (447354) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424064.1) |
| Pfam | Glycosyl hydrolases family 18 (PF00704.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |