Ll_transcript_523947

• Id Trinity: TRINITY_DN43054_c0_g1_i2
• Name Transcript: Ll_transcript_523947
• Sequence: GAAATTATAAAATCGAAAGGTGAATTAATTTATAAAATGGAAAGCGGGTGAGAACAAATTAGCACCAAAATGGCGAAGAAGAAAACAGCGAGTTCCGGTC ACCGGGAACTCAAACGAGTTGACTCAGTTCCCAATCGCAATAAATCCATCATCACTATCATTGCTATAATCATTGCTATAATCATCGCTTATCAGTTCAG ACATTCTTCTTCTTCTTCTTCTGTGTCTCACACATTCGATCCTAATTACCAAAATATCCTCACTGAAAATTCAAGAGTATCACAAAATTCTTCTCATCGC CATTACACTTATCCTGTCCTTGCCTACATTACTCCCTGGAATTCTCGGGGTTATGAAATGGCGAAGACGTTCAACTCTAAGTTTACACATCTGTCGCCCG TCTGGTATGATTTAAAGAGCCAGCAGACTAGCTTAGTTCTAGAGGGGAGACATAATGCTGACAAAGGATGGATCTCAGAGCTTAAAAAGAGCGGCGAAGC TTTGATCTTGCCTAGAGTTGTTCTGGAAGCATTCCCAGCAGAGCTGGTAAGAAAGAAGAAACTAAGGAACAAGGCTATTGACCTTATAGTAACAGAGTGC AAGGAAATGGGATATGATGGTATTGTCTTAGAATCTTGGTCAAGGTGGGCAGCTTATGGTATATTGCATGATCCAAACATGAGGAATTTGGCACTGCAGT TTGTAAAACAGCTTGGAGAAGCACTGCATTCTATAAGCAGCGAGAGAAACAGTGAGCAGCAATTGCAGTTGGTGTATGTCATAGGTCCACCATCTTCTGA GAAGCTGCAGGCTCATGACTTTGGTCCAAAAGATCTTGAGACTTTAAGTGAAGCTGTGGATGGATTCTCATTAATGACATATGACTTCTCTAATCCTCAT AAACCAGGTCCTAATGCTCCTATGAAATGGATTCAAATTGTTCTACAGCTCCTCCTTGATACCTCTGGCAATAGAGCCAAAAGCCTGGCCCCTAAGATAC TTCTTGGCATCAACTTCTATGGAAATGATTTCTCCCTTTCAAGTGGTAATTCGTTTGCTTTATTTTCTTCCTTGGGTGTCATTAGAAAAAAGACCCAAAT TGTTTCTAAAATTTTACATGGAATACTTTTAGTCCCTGACAAATGCAAAAAATCCAAATTCATCCTCAAATTTTAAATGATGGTCAAATTTAGGGACACT TTAGTTCCTATGAAGTAAGAAGTTGACTGTCATCTCAGGATCAATTCTCCCCGTGTAAAATTTAAGGGACTAATTTGTGTAAAATTTAAGGGACTAATTT GGGTCTCTTTTCTTAATATAAATGATGCTAACATGAAACTGAGTACAAGACCAAGTTGGCCCCTCATAAAGCGAACACATGGACACTTTTAGTCCCTAGG AAAAAAACTAATCATTTAGTCCGTCAAGATTAAACACGTGGGACAGTTTAGTCATTCCTTCGTTTTCATTAACATTTTCAGGGACCAATTTGGTTAACTA ATGATTTTGTCACAGACCATGTTGGTACATGATTCTCATTTTTAGCATGTCCCTAAAAACATTGAAAGGCTGAAGTATCTCACGTATGTAACCTTGAGCA ACTAAATGTTTAGAATTTTGAAGGACCAAAAGTGCCTATGTGTTCTGTTTTTAGGGATCAAAAAGGGTCTTTAATCTTTATATTATTTCTTACTCAATTG CTTGAGTGGAACATGAGCACTTTACTAAGCCATTTTGATAGTCTGAGATCTTAAAGGGCCTTTCCCTCCTTTTTTGGTTTTTGTGGCATTTTTGTTTTAC ATGTTAAGTGAAATTTGAGAATACAGATTCAGGTGGTGGAGCTATTATTGGAAGAGGTTACCTCACATTATTGGAGAAGCACAAGCCTGAACTACAATGG GATAAGAACAGTGGAGAACACTTTTTCTTGTACACTGATGACAAGGATATAAAGCATGCAGTGTTCTATCCTTCTTTAAAGTCAATTTCTTTGAGGTTAG AGGAAGCCCTTTCTTGGGGTTGTGGCATCTCCATCTGGGAAATTGGTCAAGGTTTAGATTATTTTTTTGACCTTCTATGAAAACAATGTGTTGATGTTTT AGATTATTTCTATGCCCCATGTTAATGTTTATCCAAAGTTCCAAACTATATTGAGTTTAACCAAAATGTACTTGCCAACAAATAAATAAATAAAAATGGG TCCTTTTTAT
• Tissue: pods
• Gene name: LI_gene_135468;
• Additional information: details;

Expression of Ll_transcript_523947

FPKM

• PAB: 0.1
• PNAB: 0.6
• PS1: 0.4
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0.1
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_523947

• Blastp: Chitinase domain-containing protein 1 from Homo with 35.4% of identity
• Blastx: Chitinase domain-containing protein 1 from Homo with 35.4% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (66005)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019424064.1)
• Pfam: Glycosyl hydrolases family 18 (PF00704.27)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;