Ll_transcript_523829

• Id Trinity: TRINITY_DN43081_c0_g1_i2
• Name Transcript: Ll_transcript_523829
• Sequence: CGGGAATGTGAATATTCAAAAAGAGTTACACAGACGAAGAAAAAGGATACGGTGTTGAGAAGACAGAGTGCAAACTTTGTTCCTTCTTTCTATGGATCAA ACCATATCTCGCATAGTGGCGGAGCTCGACGACCTCCGCCACAACAACCACCACCAACCACCATCTCCTCTCTCCAACGAATCCCTCTCTTCTCTGCAAC TCCTCCTCTCCGACGAAGAAGAACAAGAACCCTTAACCCGCCTCTTCGATGAGCTCTCCTCCAAATCCCTCTCTCCCTCCGCCCTCATCTCACCGATCTC CTCCGCCATGGATTCCGGTTCCCTCACCGCTTCCGACGTCTTCCTCTCGTTACTGCTTTCTCAAAACGCACCCGTTTTCACTCTCTTTACTCCAATCTCG TTTCTCTCTTTCCTTCGCTCCCTTCGTCGCTCTTTCAAAAACCCTCCACCCGGTAACTCGGCTCAACCGAGTCAGGACGGTTCGGTTTCGAGGAAGAACC CGAAGAGAAGGCGCACTGGGAAGGGTAAGGCTTCGAGGAAGAGTAATGGGTCGCGAAACGACGACGTTGAAGGGGTTTATGTTGATTTTAGGGTTTTGAT TCTCGTGTTGGAGAAGCTTGTGATTGTGATGGGTTTGATTCATTTGGATAGGTTTCCTGAGAGTCTCAAGTCTTTGGTTCAGACAATGTGTGAAATTCCG GTGGCGGCGCTTGATTTGTGTGGGAATTCAGGGGAGTATGGTAAATTGGTGAATTTGTGTTCTAGGGTTTTGTGTGAAGTTTTGAAACCTGAGCATGGTG AGCCTTTGAGTACTGCTCCTGAGGTGTTGAAGTCTTTGACTTTATTGATTCTTATGCCGAAATCGCAAGCTAGGACTTTTGCTCTTGAGTTTGTTGTGAG GGAGATGAGGAACATGGCTAGAGAGTGTGATGGGGTGAAGAAGGCATTGGTTAATTTTCCTAGGTATTTGGCGAACAAGGCACCAGAGAAGTCAGAGCCT AGAGCATTGGCAGTGGAATCAGTTATGGAAATTGTTCGTGTTATGGGGTTTGAGGATCAAATTGAATTTGTTAAATATGTTGTGCAAATGTCTAGAGGGA AATCAAATCTTAGGCTCTTGGCCATTGATCTTATTTTGAACCTTGTAATGTTGTTGAAGGATCCATTGGGTGTGAATTCGGAAGATGAAATGAATGAGCC TTGGGGGATATGGTGCTTGGAGGCGTTGGTGAAGCGTTGTAATGATGTGAGTGCTGTGATTCGAGCTCGGGCTTTGTCAACCTTAGCTCAACTAGTGGGA TTTCTCTCAAGTAATGCTGATTGTAATGTGATTTTGAAACAGTTTATGGGCTTTGGTAAGGTCAGTGATAATAATGCTGAAGGTGGAATAAATGATATGC TGAGGAGAAGGTGTATGGATGATAAGGCAGTTGTAAGAAAGGCTGCTCTTCTTCTAGTTACTAATTTGACCGCCCTTCTCGAAGGTGTGATTGATGAAGT GGTGCTCAAGACAATGGGCATGGCTTGCTCGGATCCACTTATTAGCATGAGAAAAGCAGCAAGTGCAGCCCTTTCGGAGGCTTTTAGAAAATTCTCTGCT GAAACAGTAATGACTGAGTGGCTACATTCAGTTCCACGTCTTATAGCTGACAATGAAACTAGCATCCAAGAAGAATGTGAGAACATGTTTCAGGAGCTTG TTTTGGACTGGATATCTAGAGCTGCATCTGCTATCCCTCCACACAGTGAATCCATTTCTAAGAGAAAAATGAAAGAAAAAAGTTTAGACGCAGAGATGGA GAAGCTTTTCCCCAAAGGAGTCTTGTATCTTCTGAGAGAGATTTGCAATGGAGAGGTGAGCCCTTGGGTGAAGAAAATTTGCTCAAACCTGGGAAAAAAG AAACGGCTGAATCGCAAAATTGTTATTGCACTTCAGAATATAATTAGAGTCTCAGAATCTATTTGGCTGAGTCATTCCATGCCAATTGAAAAATGGACAG CCCCACCTGGTGCTTGGTTTCTTTTATCAGAGGTGTCAGCATTCCTTTCAAAAGCAGTCGACTGGGAATTTCTCCATCATCATTGGCAGCTTCTTGACAA ACATGAAGTAGAAGGTGAGTTTAAAAGCCCATTTGTACAAAGAAATGCGTTTGAAGAGGAAGAAAGCATAGAATGCAATTCCGTTGCCTGGGCTAGTGAC CGAGTTTTCCTCTTACAGACAATCTCTAATGTTTCTGTGGAGCTGCCTCCTGAACCTGCAGCTGATTTGGCTCATAACTTGCTCAAACGGGTTGAAGAAT TCAATATGCATACAACAGAGGTTGATGCTCATGTAAAAGCGCTTAGAACACTGTGCAAGAGGAAAGCTTCAAATCTCATGGAGGCAGAAGCATTAGTCTT GAAATGGGTACACCAAGTTCTCTCCAGAGCTACTAGAATAATTGAGAAGTTCATTTCACAGAATTCAGTGCAAAATCCAGAAAGTACCTTTTTTACTCCA CCTAGAACTGGGGGTAGAAAAAGCAGGAAATCAGTAGCAATGTCCAAGTCGTTGTCAAAAGCAACTACAGCAATTTATACCATTGGGTCTTTAGTTATTG TCTGCCCATCTGCTGATATAAGCATTGTAGTTCCATTACTGCATACTATAATCACTTCAGGGAGCTCTGGTCCCAAATTAGATAAGTTACCTGGCCCTAC GACCTCTCTACAACAAAATGCTCCTTCTTTTTATATTCAAGGGTGGGTTGCCATGGGCAAGCTTTGCCTTGCTGATGGGAAGCTTGCAAAGAATTATATT CCTCTGTTTGTACAGGAGCTTGAAAAGAGTGATTCTGCAGCTCTTCGAAACAACATTGTGGTGATGATGGCAGATTTTTGTGTTCGGTACACTGCTCTTG TTGATTGTTACATAACAAAGATCACAAGGTGCCTCTTGGATCCTTGCGAACTTGTAAGAAGGCAAACATTCATATTGCTCTCCAGATTGTTGCAGAGGGA TTATGTGAAGTGGAGAGGAGTGCTATTTCTTCGGTTCCTTTTGTCACTAGTGGATAGGTCCGAGAAAATTAAGCAGTTAGCAGATTTTCTCTTCGGAAAT ATTTTGAAAGTCAAGGCTCCACTTTTAGCATATAATAGTTTTGTAGAGGCTGTTTTTGTTCTGAATGACTGCCATGCCCATAATGGACATCGCGAGTCCC TTAGCTCACGAAAGGAGAGCCAACTTTTTTCCATCAGCGGTGTGGATGAAGAGTCAAGATCTAAAAGAATGCACATTTATGTTTCTTTACTAAAACAAAT GGCTCCTGAGCATCTTCTAGCAACTTTTGCCAAGATATGTGCAGAAATTCTGACTGCAGCTTCTGATGGTATGCTGAATATAGATGATTCAACAGGGCTG TCTGTTCTACAGGACGCTTTTCAAATTCTTAGCTGCAAAGAGATTCGCATTCCATCCACACGTGCACCATCTGAGTCAGCAGAGATAGAAGATGAAGGGG GAGAAAATGGAGCTGCAGCAAGAGGAAAGGCTATAACTCAGGCAGTGAAGAAGGGCCTTATCCAAAACACAATCCCCATATTCATAGAGTTGAAACGTCT ATTGGAAACCAAGAACAGTCCCCTGATAGGGTCTCTCATGGAGTGCCTCCGGGTTCTTCTAAAGGACTATAAGAATGAGATTGATGACATATTGGTTGCT GATAAGCAGCTGCAGAAGGAGCTTATCTATGACATGCATAAATATGAGGCAGCAAAAGCTAAAGCAACAATTGCCGAGGCTGTGGCCACAAAGCCAAAAC CAGGTGCATTTCAATCACCTGATGCTTCTAGAAACCTGACAAAGACACAAGGTCAAAGCCGATACGTAAACAAGTTTCCAAATGGTTCAAAAGTTGCATC AGCAATGGCAGATGCAGCAGCAGCAGCAACAGCTCGTTCCGTGCTCCGGGAAATCAACAAGGGCACAGGGACACCACCACTTAGTTCTCTGAGTGTTCCT AAAGTCAGGTCTGGCACTAGTGTACGCAATTCTAGAGATGATAAGCGCATGGATGTCATAGAAGCTGTGAAGAAAAGACAGTCTTTTGATTCTGATGAAG AAAACTAACATTACATTGCATTTCTCTATTTGTAATTTATAATAATTTCAGGTTTCCTTTCTCTAAGTGCCATTGGAGCCTGAATGAGGGGTCTTTCATG ACATGTATAGGGGCTTGTTGCTCCATTCCCATCTTTTAAGGGCCACTGTATGATTAAACCCTTGGTCTTGTTGAGAGGTTATTCTTTGGACATAAATTTC TCTTAGCTAGCACTATCCTTTGCCTGACTTAATAACTTGTGAGGGATGAATTTTATTAGTAAATAATATTATTTATTATATGAAATGTAAA
• Tissue: pods
• Gene name: LI_gene_135507;
• Additional information: details;

Expression of Ll_transcript_523829

FPKM

• PAB: 0
• PNAB: 6.5
• PS1: 5.2
• PS2: 1.7
• PS3: 2.2
• PW1: 2.9
• PW2: 0.6
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_523829

• Blastp: Condensin-2 complex subunit D3 from Mus with 25.81% of identity
• Blastx: Condensin-2 complex subunit D3 from Mus with 26.35% of identity
• Eggnog: Non-SMC condensin II complex, subunit D3(ENOG410XSGK)
• Kegg: Link to kegg annotations (78658)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419468.1)
• Pfam: non-SMC mitotic condensation complex subunit 1 (PF12717.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;