Ll_transcript_523768

• Id Trinity: TRINITY_DN43084_c0_g1_i4
• Name Transcript: Ll_transcript_523768
• Sequence: CAGTGATTGGTCACGTCATACAAAGTCTTCCTTTTAAAGACAGTGATTGGTAAGTCGCAAAGTTTTCTGCTACACTTGGAAACAGCGTATAACCCCACCA CGAACCACCAAACCGTTAGTAACAGTAGTCACACGCAAAACGGAAACCAGGTTATAGCGACTCACCAACAAAATTCAAGTGTGTTTAACAAAACCAAAAG AACCCTACTTTGATTTGAACTTGTTCTTGCACAAAGATAGTTTTTTTCTCTTTTTCATGGGCACTGATGCAATGGGAATTGATGGGTATTCTCTGCTGAA GGATTTAAGGTTGGAAATTGAAGCAAAGGAAGGAACTTTCTCTCTCTGCTTTTGGGTTTATTTGACGAGCTCTATTACATTCCCTGTCACCGTTGTTCAG CAGATTTGCTCTGATATCTCCAAGAGTGCTCCTTTTCTTGTAATTAACGATAATAAGAGAATCAATCTCTTACCAGTTCTGATCTTACATAAAGAAGCTC CTGATACTTTCAATATCAATTCCTGGACAGAAGTTCCACATGCAACTGTAGATTTAGAATTTCCAGTGGGAAAGTGGGTTCATGTTGGATGTGAGGTTTC TCCAAGCCATGTCCAGCTTCAGATTAATGGAGATATTGTAGGAAAAAGATCTCTTACTTCCTTATTAAATAGGGAACCCGATTCAAGTAATTTGAAGAAA ATAACTTTGGCAAATGTTGGTGGAGATGAAAATAGTGTTCAGGGTTATGTGCACAATTTTGAAGTCTTCCCTCTTGTTTCTTCTATTAAGGATCACCACT TAAAGGATCCTCCTTTGAAGTTATCAATCGATGAATCATCTGCTTCCGAGATTGAAGAAGAAAATGATGGTGTTTGGGGCATTGTTGGTGGCAAGGCATC TTGTCGTAGGAACTTTTCTTTGGATGTTGTTCTTTCAGATGCCTTTGGCCAGCCAGTAGATAAGGAGAATGAGGTTTTTGCTTCACTTTTGTATGCTGAC ACGGGGGCACCGGTGGAGAACACAACTGATGAAGAAGCACCCCTTTTGGTTAGCTATGATGGAATTGAATTTTCATCTTGCGAAAGACCAAGTAAACTTT TGATGGGGCGTGCATCATTTAAGCTCAAGATATCTCAGCTTTCATCTAAGTGTGATAACAGGTTATTCATCCTCAGATTTTGTGTTCCGAAATTGGGGAG TTATTCTTTTCTTGAGGCATACTCTCGTCCAGTTCGATGCATCTCCAGGAGCCGTAACACACGATTGTCCACTCTGGTGTGGAAAAGGTCAACTTCTGCA CTTAATCGACTTAGTTTATCACAATGTTCAGCAAAGGATGATGGGCCGTTGGAACGTCAGCATTCTGGTCATGAAGCAAAAGCCAATCCACTGATGAAGC GGTTTAGACTTGGACAAGATAAAATATCTGTATCAGTGAAGGCTGACCCCAACTTAGTGCGACCTGATGAGGAGTGTAATTCTCATGTCTTGACTTCTAA TCAGGTTGAGAACGGGTTCACAGCAAGCTTGGATGGCAGACCTGCTAATTTTGATGAAGCATATGACTGTCCATCTGATTCAGAGAGTATAGGGGAGAGA AACTCACCCCCAGATAGTATGGCAAGTAGAAGATATGAAATATCTGATATGACCATTTTCAAATACTGCCTGGCAGGCTTGGCTGAGAGATCTCTCATGC TTAAAGAAATTGCTCCCTCTGCTTCCGACAAAGAAATTTCAGAGTTGGCTCATCATGTGTCACTCTATTCAGGATGTTCACACCATGGAAACCAAATATT AATTGCGAAAAGATTGATCAAAGATGGTATTAATCTGTGGAAGTTGATGTCTCCAAATAACCAGCACATTCCTTGGCAGAATGCAGTCTATGAGATTGAA GACCAATTCTTGAGGATTGCTTCTTCTCGTTCAAGGTCTCTCTCAAATCAGGATTTAGAGCTTCTGAGAAAGATTGCTGGATGTCAAGAGTATCTAACCC AAGAGTGCTTCGAGAAATTGTGGTGCTGGCTGTACCCTGTCGCTTTTATAATATCAAGGGACTGGATAAATCCTATCTGGAATACCACATCACCTAAGTG GATAGAGGGTTTCATAACTAAGGAGGAAGCAGAAGCTTCACTTCAAGGTACCATCGGACTTCAAGAACCCGGTACCTTTATATTACGCTTCCCCACCTCA AGAAGCTGGCCCCACCCAGATGCTGGTAGCTTGGTTGTGACTTATGTTGGCAATGACTACAAACTTCACCACAGGCTACTTTCTATGGATCATGTTTATA GTTCTTATAGCTCTGGTGACAAAGGAATTGACGCGAAACCACTGCAAGATATGCTATTGGCAGAACCGGAGCTGTCTCGATTGGGAAGGATAATAAGAAG TCATTGAGCAGATTGAAGTTCCGGAAGAATTTCTTTCAACATAAGTTATGCTTTGAAGGTTGTATTTGCAAGAGACTCAAAAAGGTGGTTAGGGCAGGTT TTGTGGTTGAGTTAAGATAATATATTTTCCATGGAACATGTATATTTTGTACAGCAAGGTTTTAAGGGTGACATTTTTAACAGTGGCACCTTATGATTAT TGTGTAACTGCATATTTATTCATCTTTGAACCACCATCATTCAAACCATTGCTTTTTTAGTTAACTTCATTGGCCATTCCTATCCAGTGATCACATTTAT AGTCCTTCCCCCCACATTACTGC
• Tissue: pods
• Gene name: LI_gene_135513;
• Additional information: details;

Expression of Ll_transcript_523768

FPKM

• PAB: 0.9
• PNAB: 5.3
• PS1: 7.8
• PS2: 4.6
• PS3: 5.8
• PW1: 4.6
• PW2: 2.1
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_523768

• Blastp: SH2 domain-containing protein B from Arabidopsis with 51.2% of identity
• Blastx: SH2 domain-containing protein B from Arabidopsis with 51.2% of identity
• Eggnog: NA(ENOG41116R2)
• Kegg: Link to kegg annotations (AT1G78540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453521.1)
• Pfam: Concanavalin A-like lectin/glucanases superfamily (PF13385.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;