| Id Trinity | TRINITY_DN43085_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_523795 |
| Sequence | CTTTGAATTATTGGCACTCAGAAATGGGTGCATCAAATTTGATAGTAACTATCAACCTCTTCATTCTGTTATTCTCATCATCAGTGTTCAGCTCAGAGGA TCATGATCATAAATTTGATACTATCTATGCAAAAGAGATTCTAAGTGAAGCCCAGAAGGAGAAAGATTGGTTGGTATCAGTGAGAAGGGAAATTCATGAA CACCCTGAATTGGCTTTCGAAGAACACATCACTAGTGCTCTTCTTCGCAAGGAGCTTGATAACCTTGGCATACCTTATACATACCCAGTTGCTAAAACCG GCATAGTTGCTCAAATTGGCTCTGGTTCTCGTCCCATCGTTCTTCTTCGTGCTGATATGGATGCTCTTCCTTTGCAGGAGCTTGTTGAGTGGGAACACAA GAGCAAAATTGATGGCAGAATGCATGGATGTGGACATGATGCTCACACGACAATGCTACTCGGCGCTGCAAAGTTACTGAACCAACGGAAAGATAAACTG AAGGTTCTTCTCAAATTCTCAGTTTGCTAATTTCAGTGGATCTTTTAACTATGATGTTTGAATCTTTAAGGGAACCGTGAGACTTATTTTCCAACCCGCT GAGGAGGGAGCTAGAGGTGCCTCTGAAGTGATAAAAGACGGAGCTCTAAAAGATGCTGAAGCAATTTTTGGTTTTCACATTGATCATACAACACCTACTG GAGCCATAGCATCCAGTCCGGGGCCTATATCAGCTGCCGGATGTGTCTTTGAAGTAAAAATTGTTGGAGAAGGTGGTCATGCAGCATTTCCTCACAAAAG TGTGGATCCAATGCTGGCTACATCATTTGCAATACTGGCACTGCAACAGCTTGTCTCAAGGGAAGCTGACCCTCTTCATAGTCAAGTTGTATCAATTACC TTTGTCAAAGGTGGGACTGCACTAAACGTGATCCCATCTTATGTTGAATTTGGAGGCACTCTGAGGAGCCTGACAACTGATGGCCTGTACCATTTGAGAA AGCGACTAAAGGAGGTTATTGAAGGACAGGCAGCTGTGCAGAGATGTAATGCATATGTTGATTTCAAAGAAAAATATTACACCCCATATCCTGCTGTTGT CAATGACAAAGACTTACATCTGCATGTGGAAAGAGTTGGCCAACTTCTGCTTGGTCCAGACAATGTCCATGCGGCCGAGAAGGTGATGGCGGGCGAAGAC TTTGCATTTTATCAAGAAATAATTCCTGGAGCATATTATAGCATTGGAATCAGAAATGAGAAAGTGGGGTCAGTTCACTCACCACATTCCCCTTTCTTCT TTTTAGATGAGGATGTTCTTCCAATAGGGGCAGCAATGCACACCGCAGTTGCAGAGTTGTATTTAAATGAACACACTGTTGAGTAAGATTAGTTTTATTA TTGCTGCTGCATGCATTTTCACATGTAAAATACCAGCTTGTTATTGTAAGAGGTGAGGGGAGTGAATCTTGTTCGTCGAATCTTATTGAATGTATCAAGA TTAGAGCATAATTGCATGTAAGTTTTGCTAGTGGTTATGTGACTACTAAGCAACTTCTAATCTTGACCATTTATGTATAATTAAGAGCCAGCAGTGGTTA TCATTATCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_135514; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_523795
| Blastp | IAA-amino acid hydrolase ILR1-like 5 from Oryza sativa with 63.87% of identity |
|---|---|
| Blastx | IAA-amino acid hydrolase ILR1-like 5 from Oryza sativa with 62.64% of identity |
| Eggnog | amidohydrolase(COG1473) |
| Kegg | Link to kegg annotations (4336428) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430974.1) |
| Pfam | Peptidase family M20/M25/M40 (PF01546.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |