Ll_transcript_523999

• Id Trinity: TRINITY_DN43091_c0_g1_i1
• Name Transcript: Ll_transcript_523999
• Sequence: TCTCATCCAACCCACTTTCTCTTGCTTTTTCATACACTAATTTAACACATACACCCAACTTGGAGTAGCACTTTCTAGCTACATAGTTCTGTTCTATAAG CTAGCTGAAGCACTACCAACAACAACACAAGGAGAGTTCAATAAAATCCCAAGACCAAGAGACCAAAACAACAAAAACAGCAATACAAAATGATGCAATT CAAGATGACAGAGATGTGGACAACAATGGGCTCAACCTTAGCCAGTTTCATGTTCGTGTGGGCGATCATACGCCAATACTGTCCATACGAGGTAACGCGA TTCTTCGAGAAGTACACACACAATATCATGGGATACTTCTACCCTTATATTAGAATTTCCTTCCATGAATTCTTGGGAGACAGGTTGAAGAGAAGTGATG CATATGCTGCTGTTGAGGCATACCTCAGTGCCAACACATCGAAGAGCGCTAAGAGGCTCAAAGCTGAGATGGGAAAAGATAGCACCAACTTGGTTTTAAC CATGGATGAGTATGAGAGAGTAACTGATGAGTACAAGGGTGTGAAAGTTTGGTGGGTGTGTAGCAAGGTTATGTCACCAACAAGGTCCATGTCTTATTAT CAAGAACAAGAGAAGAGGTTCTATAAGCTGAGTTTTCATAAGAGGTATAGAGACATAATCAGTGGTTCATATTTGGAGCATGTGATGAGGGAAGGGAAGG AAATTCGTTTGAGGAACAGGCAAAGGAAGCTTTACACCAATAGTCCTGGTTATAAGTGGCCAAGTTATAAGCAAACTATGTGGAGTCATATTGTGTTTGA GCACCCTGCAACGTTCGAAACAATGGCAATAGAACCAGAGAAGAAGAGAGAGATCATTGAGGATTTGGTTACTTTCAGCAAGAGTAAGGAGTTTTATGCA AGGATCGGGAAGGCGTGGAAGAGGGGCTATCTTCTTCATGGTCCTCCTGGAACAGTGAAGGACAACACTGAGCTGAGGAAGCTTTTGATTGAGACAACTA GTAAGTCTATAATTGTTATCGAAGATATCGATTGTTCACTCGATCTTACAGGCCAGAGGAAGAAAAGGGGAGATAAGTTTTCAGATGATGAGAGTGATAA GTTGAATTCAGAAGTCGGTTTACGGAAAGAAGTGAAGGAAGAAGGAAGCAGTGGCAGCAAAGTGACACTTTCAGGGCTATTGAATTTCATAGATGGGATA TGGTCTGCATGTGGAGGGGAGAGGTTGATTGTTTTCACAACTAACTATGTGGAGAAGCTTGACCCAGCACTTATCAGAAGGGGTAGAATGGACAAACATG TTGAGCTTTCTTATTGTACTTTTGAAGGGTTTAAAGTGCTTGCTAATAATTACTTGAAGATTGAGACTCATCCAATGTTTGACACAATTAAGAGGCTGAT AAGTGAGGTTAAGATTACACCAGCTGATGTTGCTGAAAACCTTATGCCAAAGTCTCCTATGGATGATGCAGATAAGTGTCTTTCTAACTTGATTGAAGCA CTTGAGGCTACAAAAGATGAGGAGCTGTTGAGCCTGAAACAGAGTAGTCCCATCAAGCAAGATGAGAAACTCAAGCATGGCAGTCACATCAAGGAAAATG GTAAGTTACATGAGGACAATGAAAATGACCAATCATTGAACCAAAGCAGGTGATAGCGCGTTATCGATTTTATCATGTAAAAGAAATTCTGTCCTAAGGG CAAAACCTTAGGCACATTTCTTGTTATATAGTAGTATCATATATTATGTATCTATCTTTCTCAGCTCCAAGTGGAACAAAAGTAGAGATTAATATACTTT AGTGCTTTGATTTGGTTCAGATTGTGACAGTATCTGAAATATTTGTCATCCAATGTTTCTCTATATGTTTTCAACTTCTTATTAATTTTTTCCTAAAATG TAACTTAAACATTGAAACAAAAA
• Tissue: pods
• Gene name: LI_gene_135525;
• Additional information: details;

Expression of Ll_transcript_523999

FPKM

• PAB: 0
• PNAB: 0.5
• PS1: 1
• PS2: 1.7
• PS3: 0.6
• PW1: 0
• PW2: 0
• PW3: 1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_523999

• Blastp: AAA-ATPase ASD, mitochondrial from Arabidopsis with 53.58% of identity
• Blastx: AAA-ATPase ASD, mitochondrial from Arabidopsis with 53.49% of identity
• Eggnog: Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465)
• Kegg: Link to kegg annotations (AT5G40010)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464299.1)
• Pfam: Domain associated at C-terminal with AAA (PF14363.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;