Id Trinity | TRINITY_DN43121_c0_g1_i2 |
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Name Transcript | Ll_transcript_495269 |
Sequence | CTTTGGTATATCGTAAATTCATCGGATTTCACTATGACAAATATATCTTGCTTTTTGTTGTGAGGTTTGGGTTGAGGTGCAACATTGTGCGAAAGAGAGA GTATGGAGGATGGCATGCAATTGCAAGTCTCACTGGACAAGCTTCCCATCAAGCGTTTGGAATCCATCGAAGAAAATGGCCTCGAACGATTCCCTTCAGA TGCGGATTACGATGAGAAGAGGCTCTCACTGATAAGGCGAATTGATTTCGCTTGGGCTGTTGAGAAGGACGAAGAGAAGGAGGAGAAGAAGAAGCAAAAG AAGAGTTCAAAGGATACTTCTACACCATGGCAATGGCAGACCATGGTCGAGAATTTGCAGGCTGCTCATCAAGAACTCTCGGTCATTGTAGATCTCATCA ACACTGTGGAAGCAAACGATGCAGTAACTGTGGCTAGCATGACAAGGCCAAAACTATTACCGAATGAAGCTTTGTCTGACCTGGCTGTATCTGCAGCCAC CAAGCTGCAATGCTACTGTGTAAATATTATTTTATCTCATCTTTTGTACACTTTTGTTTATTTCCAGTTCATTTATGTTCATAATAGTAGGGCTAAGAGA ACTTAAGTCGTTTTGCTTAAAATTAAAGGAATGTAACTCAAAGCTTGGATCGATTGGAGTCTCTCATAACCTGTCCAAGATAACCACACCTGCTTTTACT GGGAAATGCGATGATAGTTTTGCACTAACTTTCTTCTATTTGCAGCATGTCGGGAAATACTTTAAGCAATCTGCCAAAGCTTTTGAACAGCAGGTTGCTC GGGAAGCCAGGTTCTATGGTGCTCTTATCAGGTAAGTTTCCATTATTGACGTCTAAACATTAATACACATGAAATAACATTTTAAATCAATATTTTAGAT CTTGAATTATGACATTCCATTGCATTCAAAAGCTGTCTTTTAAATAATCTGGTAAGTGGCTGTAATAATTTCATTAATGAATAAGGAAGGCCGTTGTAGG AAAATGCCTGTTTACTAGCTTACGTCACCACCTATCGCATTTCCTAATAAGCGGACAGGTTGCAGCAAAATTGGAAAGTTAAACGGCTACGTCAGGCGGC TATAGCTCCAGGGAATGAGGGCTTCACCTTCGATCTCTTTGATAACTCATATGACCAAGCAGCTATAGTCCGGTCATCGTCTATATCTACTGTTCGTGTC AATCATGATGCAGCTGGAATGCTGGCAATAGACATGTCTCCCAATTTATGCCACTCTCTCCAATTTGGTTTTGTCAGTGCACAATCAGATCATATGCAGA TGAAATCCAATGAAAACAAATCCCACTTTTCAGATGAGCATCATTTGGGAGACTCTGACAAAGAATCTTTAAGTGATGAAGAGTGCATTAAGAAAACACA TTTGCTCCTTCGTGGGGCACATAAAGCAATTTTCAATGAGCAGGTGTTTGACCTGGTGAATCGTGAAGCATTTAACTCATCTGTGGGTGTCAGTGTGACT GGAATACAGGAAAACTATTTGCAGTTAAGCTTAGGTCAGGGAGTCTCTGTGTTCTTGTCACTTGTTTCTTCTGGTCAAGATCATTCCACAGTTGAAGGTG AACTCACCAATAATGGAGAAAATTCAATTTTACCTTTGGAATCATCTGATGGAATGAGTCGTGATGCCAAACAAAACACCCTTAAGAAGAAAAGCCAGTT TTCTAATTCTACATGCTATGAGATTTATATTCAACAGGTTTTTCATGAATATATATTTGGAAGAGGCTGTGAAAAGCCAATTTCCCCTGGCAATCGTTTA TCTGGTGTACAGGCAAAGGACGGATCCAGTTTTCTTGGTCATTTTTTTATGTCTTTGGCTCATAGAATCTTTTCAAGAAAAGTTCTTTCAGAGCTGGAAA ATGTGGTATTCAAGGTCCCATATCTGGAGCTAATTTCAAACCCTACATGGCATTCGCGATCGTCATCATGGACACTCTTCATGGAGGTTCCTCGGTCGAT TCTCCATGGTCGCCAAATAAAAAATTCTGATTATGTGAAAAATGGTATCAAGCGTCAGTTTTGGACTAAGGTGGTCGTAAATGATGATTGCATCAATGTC AAAGCAGAAGGTTCGCCTAATGTGGCAGGCCTATTCAAGGGAAAGTCTGAGGAAACCCACTCAATAAACAGATATAACTGTAGCTTAGCTGATCTTCCTG TGATAATTTTGCAGCAGGTTGTAAGCCAGATTATTAATTGGCTCTATCAGGAGGCCCTGATGGTTGGGATAAAAGCAAGTCGGGACTTCTTATCCTTATC TTTTGAGCTGGAGCAAGGTGAAACACTCGGCCTGGTTGCAAATGTGGATCCTGAAGATAGTAAAGGTTGTATATCTTGGTGGTTGGTCATGGAGGACAGT TTTGCAGAGGAGCAAAAGCTTCATATGAACATCACTGATGCTGCATCTGAATATAGGAAATTCCTAGGTCATTTGTCACTTGATTTGTTATACGCAACCC TGATGGACTTAGTTGGCTTATGTAGTGGTGGTGGTCAATGAAGTTGTTTTCATGTTTTTCTTGCACTTTCAAGTAGACATATTCATGGTCTCTTTGGCAA CCATCATAATATGCTTTTATATCTGTCCGTTTTTATTGATGGCTTTTCTTAAAGCCCTTAGGACCGAGGATGAAAGGGCTAAAACAAGATCTCTGCACAG CAAAACTAAACATTTAATATTGCAATAGATATTAAAGATAATTTCCAACACATTTTTACTAATTTTTAACTCTATCCTTGGCCCTACGTGCTAAAGCCTA AAAATACATTTGGTGCC BLAST |
Tissue | pods |
Gene name | LI_gene_135572; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_495269
Blastp | Mediator of RNA polymerase II transcription subunit 17 from Arabidopsis with 50.23% of identity |
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Blastx | Mediator of RNA polymerase II transcription subunit 17 from Arabidopsis with 50.71% of identity |
Eggnog | Subunit 17 of Mediator complex(ENOG410ZFCQ) |
Kegg | Link to kegg annotations (AT5G20170) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464238.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |