| Id Trinity | TRINITY_DN43121_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_495274 |
| Sequence | CTTTGGTATATCGTAAATTCATCGGATTTCACTATGACAAATATATCTTGCTTTTTGTTGTGAGGTTTGGGTTGAGGTGCAACATTGTGCGAAAGAGAGA GTATGGAGGATGGCATGCAATTGCAAGTCTCACTGGACAAGCTTCCCATCAAGCGTTTGGAATCCATCGAAGAAAATGGCCTCGAACGATTCCCTTCAGA TGCGGATTACGATGAGAAGAGGCTCTCACTGATAAGGCGAATTGATTTCGCTTGGGCTGTTGAGAAGGACGAAGAGAAGGAGGAGAAGAAGAAGCAAAAG AAGAGTTCAAAGGATACTTCTACACCATGGCAATGGCAGACCATGGTCGAGAATTTGCAGGCTGCTCATCAAGAACTCTCGGTCATTGTAGATCTCATCA ACACTGTGGAAGCAAACGATGCAGTAACTGTGGCTAGCATGACAAGGCCAAAACTATTACCGAATGAAGCTTTGTCTGACCTGGCTGTATCTGCAGCCAC CAAGCTGCAATGCTACTGTCATGTCGGGAAATACTTTAAGCAATCTGCCAAAGCTTTTGAACAGCAGGTTGCTCGGGAAGCCAGGTTCTATGGTGCTCTT ATCAGGTTGCAGCAAAATTGGAAAGTTAAACGGCTACGTCAGGCGGCTATAGCTCCAGGGAATGAGGGCTTCACCTTCGATCTCTTTGATAACTCATATG ACCAAGCAGCTATAGTCCGGTCATCGTCTATATCTACTGTTCGTGTCAATCATGATGCAGCTGGAATGCTGGCAATAGACATGTCTCCCAATTTATGCCA CTCTCTCCAATTTGGTTTTGTCAGTGCACAATCAGATCATATGCAGATGAAATCCAATGAAAACAAATCCCACTTTTCAGATGAGCATCATTTGGGAGAC TCTGACAAAGAATCTTTAAGTGATGAAGAGTGCATTAAGAAAACACATTTGCTCCTTCGTGGGGCACATAAAGCAATTTTCAATGAGCAGGTGTTTGACC TGGTGAATCGTGAAGCATTTAACTCATCTGTGGGTGTCAGTGTGACTGGAATACAGGAAAACTATTTGCAGTTAAGCTTAGGTCAGGGAGTCTCTGTGTT CTTGTCACTTGTTTCTTCTGGTCAAGATCATTCCACAGTTGAAGGTGAACTCACCAATAATGGAGAAAATTCAATTTTACCTTTGGAATCATCTGATGGA ATGAGTCGTGATGCCAAACAAAACACCCTTAAGAAGAAAAGCCAGTTTTCTAATTCTACATGCTATGAGATTTATATTCAACAGGTTTTTCATGAATATA TATTTGGAAGAGGCTGTGAAAAGCCAATTTCCCCTGGCAATCGTTTATCTGGTGTACAGGCAAAGGACGGATCCAGTTTTCTTGGTCATTTTTTTATGTC TTTGGCTCATAGAATCTTTTCAAGAAAAGTTCTTTCAGAGCTGGAAAATGTGGTATTCAAGGTCCCATATCTGGAGCTAATTTCAAACCCTACATGGCAT TCGCGATCGTCATCATGGACACTCTTCATGGAGGTTCCTCGGTCGATTCTCCATGGTCGCCAAATAAAAAATTCTGATTATGTGAAAAATGGTATCAAGC GTCAGTTTTGGACTAAGGTGGTCGTAAATGATGATTGCATCAATGTCAAAGCAGAAGGTTCGCCTAATGTGGCAGGCCTATTCAAGGGAAAGTCTGAGGA AACCCACTCAATAAACAGATATAACTGTAGCTTAGCTGATCTTCCTGTGATAATTTTGCAGCAGGTAAAACTATGAAACTGAGAAAAAAAATTGATGTCA CCGTAATTTTCTTATTCATATAGTGCACAATTGCATTTATGCAGTAGACTGAATAAAAACTTGTGATTTGTGTGAGCATTGCTTCAAATATTGTATGCTT ATACATGCAACTAATATCATACAGGTTGTAAGCCAGATTATTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_135572; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_495274
| Blastp | Mediator of RNA polymerase II transcription subunit 17 from Arabidopsis with 55.43% of identity |
|---|---|
| Blastx | Mediator of RNA polymerase II transcription subunit 17 from Arabidopsis with 55.07% of identity |
| Eggnog | Subunit 17 of Mediator complex(ENOG410ZFCQ) |
| Kegg | Link to kegg annotations (AT5G20170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464238.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |