Ll_transcript_495419

• Id Trinity: TRINITY_DN43128_c0_g1_i3
• Name Transcript: Ll_transcript_495419
• Sequence: TCTCATTTAAATGTATGACTGGCTCTCCCGATAAATATAGCTTCAAGAAAACACTTTAAATCATTATGGATCTAATGAGAATTTACATTCAATACTCTCT TCCACTGCATTCTAGATAAATACTTGAGAACCCAAAAAAAAAAGTATCATCTCTCACTGAAAACCTAAATCTCATATTTCCCATGGCTGCATCCATAACA ATCCCTGCAACTGCTTGCAATAACAGAACCCATCTCAAATCTTCATACCCCTCTTCCTATTTTCCCATAAAGTTTGCATCTTTTCCTTCTTCTTCTCATG TTTCTTGCTCTGTTACCAGTGATTCTTCTGCATCCGTTTCTCCATTGGAGGAACAAAGCAAGCTCGGTAATGGGTCGTTGTTGTTTCAGAGACCCGATTC ATTTGGAAGATTTGGCAAGTTTGGTGGGAAATATGTCCCTGAAACTTTGATGCACGCGCTTACTGAACTTGAAGCTGCTTTTCATTCTCTTACTGCTGAT GAAGATTTTCAGAGAGAACTGGCTGGGATTCTGAAAGACTATGTTGGTCGGGAGAGTCCTCTCTATTTTGCGGAAAGGTTGACTGAGCATTATAAGAGGT CTAATGGTGACGGGCCCGACATTTATCTTAAGAGGGAAGATCTTAATCACACCGGGGCTCACAAAATAAACAATGCTGTTGCCCAAGCTTTGCTTGCCAA GGTTTTGGGCAAAAAACGTATTATTGCTGAAACTGGAGCTGGTCAGCATGGAGTTGCCACTGCTACTGTCTGTGCTCGATTTGGCTTAGAGTGCATTATT TATATGGGTGCACAAGATATGGAAAGGCAGGCACTTAATGTTTTCAGAATGCGTCTTCTTGGTGCCGAGGTCAGACCAGTTCATTCTGGAACTGCTACAC TGAAGGATGCTACATCAGAGGCTATAAGGGACTGGGTGACTAATGTAGAGACGACTCATTATATTTTGGGCTCTGTTGCTGGGCCACATCCATATCCAAT GATGGTAAGAGAGTTCCATGCTGTCATCGGCAAGGAAACCAGAAAGCAAGCTTTGGAAAAGTGGGGAGGGAAACCAGATGTTCTGATTGCATGTGTCGGT GGAGGTTCAAATGCCATGGGACTTTTCCATGAATTCGTTGACGATAAAGATGTCAGGCTAATTGGTGTGGAAGCTGCTGGATTTGGCCTGGATAGTGGTA AGCATGCTGCAACATTAACGAAAGGAGAAGTCGGGGTTTTGCATGGAGCTATGAGCTATCTGTTGCAGGATGATGATGGACAAATTATTGAACCACACTC TATTAGTGCAGGTTTGGACTATCCTGGTGTTGGACCTGAACATAGCTTTTTGAAAGATCTTGGGCGTGCTGAATATTACAGCATCACTGATGAAGAAGCA CTGGATGCTTTTAAGCGAGTTTCGCGACTTGAAGGCATAATTCCAGCATTGGAGACATCACATGCATTGGCATATTTGGAGAAAGTGTGTCCAACCCTTC CTAATGGAACCAAGGTTGTGGTTAACTTCAGTGGCAGAGGTGATAAAGATGTTCAAACTGTCATCAAGCACTTGAAGCTTTAAGGGACTTGTGTTCTTGT GTAGAACCAATGGTTTGGCTGCTGAATGGGCTTCATTTTCTTACTTAGACACAGAATTTGCTCAACTTAATGTTAAACCAAGTTCTAGTTAAAGAACCAT TCATATAAGGGAAGGGGTGAAATTTTTTTAATATCTTGTATTGTTTTTTATGATAATCTAAAATAAGGTGAGGAGTTAAATCTTTGTTTTCCTTCTTCAT CAGAATATTAGAGGCCTAGACTAAAATGTGATAAAAATAGTGTAAACTACTCTTGAGGTTTGTTCAAATGGTACTACACCCTATTTGTTAATGAAAATGA CATTCGTCTGCATTTGATTTTGATCTATTGGCTACCAAAAATGTTAGAGAATCATAACATAATATGCTTCAAG
• Tissue: pods
• Gene name: LI_gene_135581;
• Additional information: details;

Expression of Ll_transcript_495419

FPKM

• PAB: 31.4
• PNAB: 51.8
• PS1: 29.9
• PS2: 29
• PS3: 27
• PW1: 79.7
• PW2: 59.5
• PW3: 39.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_495419

• Blastp: Tryptophan synthase beta chain 2, chloroplastic from Arabidopsis with 81.9% of identity
• Blastx: Tryptophan synthase beta chain 2, chloroplastic from Arabidopsis with 89.05% of identity
• Eggnog: The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (By similarity)(COG0133)
• Kegg: Link to kegg annotations (AT4G27070)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425870.1)
• Pfam: Pyridoxal-phosphate dependent enzyme (PF00291.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;