Id Trinity | TRINITY_DN43149_c0_g1_i4 |
---|---|
Name Transcript | Ll_transcript_495254 |
Sequence | GTGAACCTTTCCGGCTCAACCAAGCTTATGAAAGAAGAAACACTTGATCGAAGCGATTAATATATATAAGGATTTGGTGTGGCATTAGCAAAGATATTAA TTTGATTGGCGCTGAGTCTCTGTTTCCATAATCATCTTTCCTTTTTCTTCTCTCTATGATGGCTTGGTTTCAGCAACAACTCAGTTCAGTTGACTGGGAA CAAGAATCTTACCCCACCTTTCATGATTTCTCCGTTGTACCCTTCTTCGCTCTCTTCTTCCCCACCATTCGTTTTATCCTTGACACCTTCCTTTTCGAGG TCCTTACTCCTTTTCTCACTTCATTTTTATCTTCCTCTTCTTTTTTCATCATTTTCCACTTCAAGATTTGATCATACCCTTCAAACTTTGCATCCAAGAT AAGTGTGTATGCACTTAACTAGGATTGTAAGAACAACAAAAGTTAAGATTTTGACTAATTTTTTGAAGGGCTGGTTCTAGAAAATTGTGAAGTTAAGTGT GTGTTTTGTAACACCAACTATGAGATTATAAGTTAATCTACTCAAGTAGCTGACTTGAAAAAAAATAAGTTACTTGTTGCTGTGTTGGAGGGACTTTTTA AAATAAGCTACAAGTTTATAACTTTATATGCTTGTATTTGATTGATAAACTATTTGAGTTAGCTTATGAATTATGAGCTTATAAGTTAGGAGGTTATTTC AGTTTACATCTATCAACTACTTTATCAGCTAATTTTATCCAACAATTTCACTTTAATTAGCTAGGTTATTAGCTCTTAACTTCGAGCTCCTAGTTTATAA GATTCCCTAGCTTATAAGCTTTCATCTATCTTGATTGGCCTTCAACTAGCTATAAATAATCAGCTAGTTGTTCCAAATAAAGCATAACTCGCAAGCGATA ACGATGACCCCAGGATTTGAACCTTGGTTGTTAAGTAAAGCCCTTATGGAGTGGTGCACACTTGAATTTTGAACCCATGACTTTGTAGAAAGTGGGCAGA AGATTGATTTTTGGAAATGGGCATGATATGCTGGATTTTCAGACAGATGAAAACAGAAAGAAGATTAGGAAGTTCAAGGAATCGGCATGGAAATGTGTTT ATTTTCTATCAGCAGAATTTTTTGCTCTGTCTGTAACTTATGATGAGCCTTGGTTTACTAATACAAGATATTTTTGGGTGGGTCCAGGAAGCCAGACCTG GCCAGATCAAAAGATTAAGTTGAAATTGAAGGGGCTTTATATGTATGCAGCTGGATTTTATTCGTACTCCATACTCGCATTGATATTTTGGGAGACAAGG CGCTCTGACTTTGTGGTATCCATGTGCCATCATGTTGCTTCCATCATTCTCATAGTGTTATCTTACATTTTTAGGTTTGTTCGTGTTGGATCAATTGTTT TAGCTCTTCATGATGCTACTGATGTGTTTCTGGAGACAGGGAAAATGTCCATATACAGTGGTGCTGAAAAAATTGCTAGCATTGCATTTATTGGTTTTGT TTTATCTTGGACCATACTGCGCCTCATTTACTACCCATTCTGGGTTCTTCGGAGTACAAGGTTTGTGTTAGCTCAACTCCTAGTTTACATTTTTTCCTTC TATTGTCAGTTAGGGTTCCAGACCCGTTTAGAGTGTAGCTGCAAGTCTAGGTAATAGTCACTTCCTCTCTGTAATAAGTATCATCGAGTTTACCTTTGGT CTTTGGTTTTTCTTTTTTTCACATCAAACATCAAACTTTTCTGCACAAGTACATTCTAATGACTCTGCTTACAATCCTGTTTTTATATCTCTATATCAAT TGTCTCTCTAGTGTGTTCCAGTATGATATTTGAATGGATATGATGTCAGGATTTTTACCGAGACTTATTGTCCTATTAAACTGGTTTGATTTATTGTTCT CATGATTGTTCTTTTAATATAACACACATTCTATTAAGACTTGAGCACACGGTGAGAGCTCAATTCAAAAGACTAGTCTTAAGTCCTAACATGCATTCTC TTAAGCAGAATTCTTGAGCCAAGTTTTTGTAGATTATCAACAATTCTTATTCTGACAAAAATGTTATTTCATTCTTACCTGATTCATACTATCAATAACA TTACCAATGACATTTTCTACAAGACATCTTCATTTCTAAACTTTAACCATCAAAGCTATGTCAGTGATATCAAAGTCCAATTATTAATTTCTCAAGTTTT AATTGGTTCGAAATTGAATTTATCCAAAATGATTTGGAACATGCATTAAGAAATTTTAACTGTCATGTCTTGGCAGAAGGATGAAATAAAGTATGTCCAA AATTTTGGAATTTAATATTTATGATCTTTCTCATAAGCACCTCAAGAAAAATAATTCTTGTTTCTCTCAATTCAAAAACTACTATTCAATCTAAAATGCT AGGTCCGTCCATTTTTTGTATATTATTCTATTCCTTTATTGAATTGTTTATATTCACTTATCTTTTTTGCAGCTATGAAGTTGTTTTCGCCTTTCATAAC GAAAAGTACCGGGTGCATGGTCCAATCTATTATTATGTGTTCAATACTCTTCTATTCTCCTTGCTTGTTCTTAATATTTATTGGTGGGTGCTGATGCTTC GGATGCTTGTTAAACAAGTTCAATCAAAAGGAAAAGTTAGTGAAGACATTCGGTCAGATTCAGAAGATGAGCATGAACATGAAGAATGAGCAGGAATACA TGATTGAGTGGCATCAAAATTATGTAAAGCTCACCATATTTATAGTGTAAACTAGAAACACCTTATCAAATTATTTCTGCTGCTAGTTCATGCTAGCAGT CAAAAGCTTAAAAGGAAATGCCAAGAATGATAAAGAATTGTTCCATGCACAATGAACATAAATACCCAACTCTTATCTTATATTTGTTAATATGCTTTAA TCCAACTCGACCTTTCTATGACTCAACTTTCAATTAAACâBLAST |
Tissue | pods |
Gene name | LI_gene_135619; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_495254
Blastp | LAG1 longevity assurance homolog 3 from Arabidopsis with 76.57% of identity |
---|---|
Blastx | ASC1-like protein from Lycopersicon with 71.21% of identity |
Eggnog | ceramide synthase(COG5058) |
Kegg | Link to kegg annotations (AT1G13580) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461038.1) |
Pfam | TLC domain (PF03798.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |