| Id Trinity | TRINITY_DN43149_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_495257 |
| Sequence | GTGAACCTTTCCGGCTCAACCAAGCTTATGAAAGAAGAAACACTTGATCGAAGCGATTAATATATATAAGGATTTGGTGTGGCATTAGCAAAGATATTAA TTTGATTGGCGCTGAGTCTCTGTTTCCATAATCATCTTTCCTTTTTCTTCTCTCTATGATGGCTTGGTTTCAGCAACAACTCAGTTCAGTTGACTGGGAA CAAGAATCTTACCCCACCTTTCATGATTTCTCCGTTGTACCCTTCTTCGCTCTCTTCTTCCCCACCATTCGTTTTATCCTTGACACCTTCCTTTTCGAGA AAGTGGGCAGAAGATTGATTTTTGGAAATGGGCATGATATGCTGGATTTTCAGACAGATGAAAACAGAAAGAAGATTAGGAAGTTCAAGGAATCGGCATG GAAATGTGTTTATTTTCTATCAGCAGAATTTTTTGCTCTGTCTGTAACTTATGATGAGCCTTGGTTTACTAATACAAGATATTTTTGGGTGGGTCCAGGA AGCCAGACCTGGCCAGATCAAAAGATTAAGTTGAAATTGAAGGGGCTTTATATGTATGCAGCTGGATTTTATTCGTACTCCATACTCGCATTGATATTTT GGGAGACAAGGCGCTCTGACTTTGTGGTATCCATGTGCCATCATGTTGCTTCCATCATTCTCATAGTGTTATCTTACATTTTTAGGTTTGTTCGTGTTGG ATCAATTGTTTTAGCTCTTCATGATGCTACTGATGTGTTTCTGGAGACAGGGAAAATGTCCATATACAGTGGTGCTGAAAAAATTGCTAGCATTGCATTT ATTGGTTTTGTTTTATCTTGGACCATACTGCGCCTCATTTACTACCCATTCTGGGTTCTTCGGAGTACAAGGTTTGTGTTAGCTCAACTCCTAGTTTACA TTTTTTCCTTCTATTGTCAGTTAGGGTTCCAGACCCGTTTAGAGTGTAGCTGCAAGTCTAGGTAATAGTCACTTCCTCTCTGTAATAAGTATCATCGAGT TTACCTTTGGTCTTTGGTTTTTCTTTTTTTCACATCAAACATCAAACTTTTCTGCACAAGTACATTCTAATGACTCTGCTTACAATCCTGTTTTTATATC TCTATATCAATTGTCTCTCTAGTGTGTTCCAGTATGATATTTGAATGGATATGATGTCAGGATTTTTACCGAGACTTATTGTCCTATTAAACTGGTTTGA TTTATTGTTCTCATGATTGTTCTTTTAATATAACACACATTCTATTAAGACTTGAGCACACGGTGAGAGCTCAATTCAAAAGACTAGTCTTAAGTCCTAA CATGCATTCTCTTAAGCAGAATTCTTGAGCCAAGTTTTTGTAGATTATCAACAATTCTTATTCTGACAAAAATGTTATTTCATTCTTACCTGATTCATAC TATCAATAACATTACCAATGACATTTTCTACAAGACATCTTCATTTCTAAACTTTAACCATCAAAGCTATGTCAGTGATATCAAAGTCCAATTATTAATT TCTCAAGTTTTAATTGGTTCGAAATTGAATTTATCCAAAATGATTTGGAACATGCATTAAGAAATTTTAACTGTCATGTCTTGGCAGAAGGATGAAATAA AGTATGTCCAAAATTTTGGAATTTAATATTTATGATCTTTCTCATAAGCACCTCAAGAAAAATAATTCTTGTTTCTCTCAATTCAAAAACTACTATTCAA TCTAAAATGCTAGGTCCGTCCATTTTTTGTATATTATTCTATTCCTTTATTGAATTGTTTATATTCACTTATCTTTTTTGCAGCTATGAAGTTGTTTTCG CCTTTCATAACGAAAAGTACCGGGTGCATGGTCCAATCTATTATTATGTGTTCAATACTCTTCTATTCTCCTTGCTTGTTCTTAATATTTATTGGTGGGT GCTGATGCTTCGGATGCTTGTTAAACAAGTTCAATCAAAAGGAAAAGTTAGTGAAGACATTCGGTCAGATTCAGAAGATGAGCATGAACATGAAGAATGA GCAGGAATACATGATTGAGTGGCATCAAAATTATGTAAAGCTCACCATATTTATAGTGTAAACTAGAAACACCTTATCAAATTATTTCTGCTGCTAGTTC ATGCTAGCAGTCAAAAGCTTAAAAGGAAATGCCAAGAATGATAAAGAATTGTTCCATGCACAATGAACATAAATACCCAACTCTTATCTTATATTTGTTA ATATGCTTTAATCCAACTCGACCTTTCTATGACTCAACTTTCAATTAAAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_135619; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_495257
| Blastp | ASC1-like protein from Lycopersicon with 70.21% of identity |
|---|---|
| Blastx | ASC1-like protein from Lycopersicon with 70.21% of identity |
| Eggnog | ceramide synthase(COG5058) |
| Kegg | Link to kegg annotations (543781) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461038.1) |
| Pfam | TLC domain (PF03798.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |