| Id Trinity | TRINITY_DN43172_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_495367 |
| Sequence | GGAACATGTCATGCATGGCATATATATCCCAAGCTTAAGGTCCTTAGTATTGTGTTGAGATGGCTCAGCTGGTTGGTGAGGATGAGATAGAGTCTCTAAG AATTGAGTTGGCAGAGATAGGAAGGAGTATAAGGTCCTCATTTAGAAGCCATGCCTCGAGTTTCCGGAGCATTGCAAGCATCGATGCTGTGCAAGATGTT GAAAGGGATGAGGAAGAGACATCACTATGGGCTGAAATCCAGAGGCTACCTACTTTTGAGAGGATTACTTCAGCTTTGATTGATGTACATGATGATGATA GCATGAAAACAAGAGGGAGAGTTCAAGGGAAACAGGTGGTAGATGTTAGCAAGCTTGGAGCTCAAGAACGCAATGTGTTCATAGAGAAGCTTATCAAACA CATCGAAAATGATAATCTTAGACTATTGCAGAATCTGAGGAAAAGAATTGACAAAGTTGGTATTAAGTTACCCACAGTGGAAGTTAGGTATCAAAATCTC TGTGTGGAAGCAGAGTGTCAGGTAGTTCAGGGCAAGCCCATTCCTACTTTGTGGAACACCCTAAAAGGGGGGATCTTTGACGCCGTTACTTTGTCAGTTC TGAAATCTCAAAATTCCAAGATAAGCATAATCAAAGATGCCAGTGGCATTATTAAGCCCGGAAGGATGACCTTATTGCTTGGTCCTCCGGCGAGTGGCAA AACAACATTGTTGTTGGCATTGGCTGGAAAGCTTGATCATTCTCTCAAGGTTCAAGGAAAAATTTCTTACAATGGACACCTGCTAGACGAATTCATTCCT CAGAAATCCTCGGCATATGTAAGCCAATATGACCTGCACATTTCAGAGATGACCGTGAGGGAAACTCTCGATTTCTCAGCACAATGTCAGGGTGTAGGAA GCCGAGCTGAACTTCTGATGGAAGTCAGTAGAAGGGAGAAAGAGGCAGGGATAGTGCCAGACCCTGATTTAGATGCATATATGAAGGCGACATCATTAAA AGGACTGAAGAGCACCCTTCAGACAGACTATATTTTAAAGATCCTTAGTCTTGATATATGTGCTGATACATTGGTTGGAGATCCTATAAGAAGAGGTGTA TCTGGAGGTCAAAAAAAAAGGTTAACTACAGGGGAGATGATTGTTGGACCGACAAAAGCTCTATTTATGGATGAAATATCCAATGGTTTAGATAGCTCCA CCACTTTCCAGATAATCTCTTGTCTCCAGCATCTGGTGCATATCACAGATGCCACTGCATTAATTTCACTCCTTCAGCCAGCACCAGAGACCTTTGATCT TTTTGATGACATTGTCTTAATGGCAGAAGGGAAAATTGTGTACCACGGCCCACGTGATTATGTACTTGAGTTCTTTGAGGATTGTGGGTTCAAATGCCCA CAAAGAAAAGGCACCGCCGACTTTCTTCAGGAAGTTATCTCTAAAAAGGATCAAGCACAATATTGGAGCAGGACAGAAGAACCTTACAGTTATGTTTCTC TTGACCAGCTCATTAAGAAATTTAAGGATTGCCCTTTTGGTCAAAAGCTGGAGAAGGAGCAGTTGCAGCCATTTGATAAGTCTCAGAACCACAAGAATTC ACTCACATTTAGAAAATACTCATTAACAAAATGâBLAST |
| Tissue | pods |
| Gene name | LI_gene_135647; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_495367
| Blastp | Pleiotropic drug resistance protein 3 from Nicotiana with 68.06% of identity |
|---|---|
| Blastx | Pleiotropic drug resistance protein 3 from Nicotiana with 68.06% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (107764055) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019455889.1) |
| Pfam | ABC-transporter extracellular N-terminal (PF14510.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |