Ll_transcript_452179

• Id Trinity: TRINITY_DN43232_c0_g1_i3
• Name Transcript: Ll_transcript_452179
• Sequence: ATAAACTCCATGCCCAACTGAAGAGAGAAAAAGAACCTCTATTCTTCTCTGTAACATACCTAAGAGTTCTTTCACAGTCTCAACAAAAGTAACTGCTTCA ATCGGAAATGAACACCGACAACGATTCCAAAAAAGTTGAAAACTCCTCTGTTCAAATGGATTATATTGACTCTTCTGTTCTTCAGGGCAAAGACAGAGAA AAAGAGGAGCTCACTGAGACGATGAACAAACTACATATTGAAGGATCATCATCTGGGAGTGGACCCTTCAAAAGAAAACCGGTCATTATCATAGTTGTAG GAATGGCAGGGAGTGGGAAAACAACACTCCTCCATAGGTTGGTTGCCCATACACACCAAAAAAACATTCGGGGGTATGTGATGAATCTTGATCCAGCTGT CATGACACTCCCATACGCTTCTAACATTGATATAAGAGACACAGTCAAGTACAAGGAAGTCATGAAGCAGTTCAACCTTGGCCCTAATGGAGGAATAATG ACCTCCCTTAACTTGTTTGCTACCAAGTTTGATGAGGTAGTTTCTGTTATTGAGAAGCGAGCTGATCAACTTGATTATGTTCTTGTGGATACCCCTGGTC AGATTGAGATATTCACCTGGTCTGCTTCTGGTGCTATAATCACAGAAGCTTTTGCCTCCACATTTCCCACTGTAGTTACCTATGTAGTCGATACACCTCG TGCAGAAAATCCCACCACTTTCATGAGCAACATGCTTTATGCTTGTAGTATCCTCTACAAGACAAGGCTACCTCTCATTTTGGCATTCAACAAGGTTGAT GTTGCACAACATGAGTTTGCCTTGGAGGTATTGTTTATTTTTGATGAATCTTATGTTTAGTTTTAGTCATACATGTTGCATTATCAAGATTAGTTACTGG AAAGTGAAAAGAAAAATATTTAACTTGTAGATTTTCTAACTCCCTAATAACATGTTGAGGTTAATTTCCAAAGCCTACACACACAATGTTATCAAAGGTC AACTTGTTTAAAGTAGGAGGTGGATATAATTATGTTCATGTATTGTATGTATAATCACTATTAAAAGGCCTCATACTCAAAATATTGGTGTTTGGGCAAT AAGTAATTTCCATTTTAATAGTTTGGAGTGAAATCGTAAGAAATATCAATAGGTAAAATATTCATTTCACTTTTCACGTTGGAGAATTATTTGTGCATAG TGATTGAACCATTGCCCTTTATGTCTAGAGTTTATGACCTCATTCTTTTGCATCTTTAAGCTAGATATTTGTTTCTCCATGTGTGGCCCAATTCCCCACC AATTTATTGTTGGTTTAATATTTATCCGTTCCTTGCTCTGTCTGTTAAACTTGAATTTGAATGTTTTGTCTTGTTTTTATAATTTGCCCTAAATTTATTT TTTACTTGTACATTTTGTTTAATTTATTGTGTATCTAGTGGATGGAGGATTTTGAGGCATTCCAAGCAGCAGTAAGTTCAGATCAATCCTACATATCAAC TTTAACTCAGAGCCTTTCTCTTGCACTGGATGAATTCTACAAGAATTTAAGATCAGTTGGAGTTTCTGCAGTTTCTGGTGCAGGAATTGATGCCTTCTTT AAGGCTGTTGAGACCAGTGCAGAGGATTACATGGAAAACTATAAGTATTGTCTGGGCCTGAAAGTTTTTTTAATTTGTTAGCTAGACCATTAACTATCAG TATAGCATTTAACTAGGGCAGTATTGGTTTGAAATGGCTAACCAAATAACTTCATCGTATTGTGCTATGTTTAGGGCTGATCTTGATAAAAGACGTGAAG AGAAGCTGCGTTTGGAGGAAGACCGCAAGAGGGAGAGCATGGATAAATTGAGGAGGGACATGGAGAAATCTGGGGGAGAAACGGTAGTCTTGAGCACTGG TTTGAAGGACAAAGAAAAGGGGAGTAAAAGCATGATGGATGAAGATGAGGTTGAAGAGGATGAGGACATGGATGATGATGAAGATTTGGGGATATATTCC GAAGAGGATGATGTTATAGATGAGGATGAAGATGAGGAGGTCGATAGGTTCGTGATGTGATTTCATCACCAACTTGATTGTATCAGAGCTCATTTTTGTA TAGGACCTTGATTTTCACTTGGTACTTGTATACAGAGATTGCAAGTTTTACTACTAATTAATGGACGATTATATTTCATATATCTGGTCAGTAATATTCC ACTGGGCTCTTTTCAGGATGCTTTCTAACACTAACTGCGTTCTTGAAAAAGAGGAGAGGAAAAAATGTATGCATTAAACAATCATCAATAGAAAGCATGC AATCATTGACTCTTTTCACTTGATACTTTTATAAAAAGTGTGCATCTATGCAATCATTCTAAAATAAAGCATGCATGAGTGATGTATTAATTATGTATAA AACTGCATACTCTTCAAATAAATTAGTCTATTTTTTT
• Tissue: pods
• Gene name: LI_gene_135730;
• Additional information: details;

Expression of Ll_transcript_452179

FPKM

• PAB: 1.6
• PNAB: 1
• PS1: 1.3
• PS2: 1.3
• PS3: 1.2
• PW1: 0.9
• PW2: 1.1
• PW3: 1.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_452179

• Blastp: GPN-loop GTPase 1 from Dictyostelium with 68.95% of identity
• Blastx: GPN-loop GTPase 1 from Dictyostelium with 68.95% of identity
• Eggnog: GPN-loop GTPase 1(ENOG410XNRC)
• Kegg: Link to kegg annotations (DDB_G0293220)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463276.1)
• Pfam: CobW/HypB/UreG, nucleotide-binding domain (PF02492.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;