| Id Trinity | TRINITY_DN43232_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_452180 |
| Sequence | ATAAACTCCATGCCCAACTGAAGAGAGAAAAAGAACCTCTATTCTTCTCTGTAACATACCTAAGAGTTCTTTCACAGTCTCAACAAAAGTAACTGCTTCA ATCGGAAATGAACACCGACAACGATTCCAAAAAAGTTGAAAACTCCTCTGTTCAAATGGATTATATTGACTCTTCTGTTCTTCAGGGCAAAGACAGAGAA AAAGAGGAGCTCACTGAGACGATGAACAAACTACATATTGAAGGATCATCATCTGGGAGTGGACCCTTCAAAAGAAAACCGGTCATTATCATAGTTGTAG GAATGGCAGGGAGTGGGAAAACAACACTCCTCCATAGGTTGGTTGCCCATACACACCAAAAAAACATTCGGGGGTATGTGATGAATCTTGATCCAGCTGT CATGACACTCCCATACGCTTCTAACATTGATATAAGAGACACAGTCAAGTACAAGGAAGTCATGAAGCAGTTCAACCTTGGCCCTAATGGAGGAATAATG ACCTCCCTTAACTTGTTTGCTACCAAGTTTGATGAGGTAGTTTCTGTTATTGAGAAGCGAGCTGATCAACTTGATTATGTTCTTGTGGATACCCCTGGTC AGATTGAGATATTCACCTGGTCTGCTTCTGGTGCTATAATCACAGAAGCTTTTGCCTCCACATTTCCCACTGTAGTTACCTATGTAGTCGATACACCTCG TGCAGAAAATCCCACCACTTTCATGAGCAACATGCTTTATGCTTGTAGTATCCTCTACAAGACAAGGCTACCTCTCATTTTGGCATTCAACAAGGTTGAT GTTGCACAACATGAGTTTGCCTTGGAGTGGATGGAGGATTTTGAGGCATTCCAAGCAGCAGTAAGTTCAGATCAATCCTACATATCAACTTTAACTCAGA GCCTTTCTCTTGCACTGGATGAATTCTACAAGAATTTAAGATCAGTTGGAGTTTCTGCAGTTTCTGGTGCAGGAATTGATGCCTTCTTTAAGGCTGTTGA GACCAGTGCAGAGGATTACATGGAAAACTATAAGGCTGATCTTGATAAAAGACGTGAAGAGAAGCTGCGTTTGGAGGAAGACCGCAAGAGGGAGAGCATG GATAAATTGAGGAGGGACATGGAGAAATCTGGGGGAGAAACGGTAGTCTTGAGCACTGGTTTGAAGGACAAAGAAAAGGGGAGTAAAAGCATGATGGATG AAGATGAGGTTGAAGAGGATGAGGACATGGATGATGATGAAGATTTGGGGATATATTCCGAAGAGGATGATGTTATAGATGAGGATGAAGATGAGGAGGT CGATAGGTTCGTGATGTGATTTCATCACCAACTTGATTGTATCAGAGCTCATTTTTGTATAGGACCTTGATTTTCACTTGGTACTTGTATACAGAGATTG CAAGTTTTACTACTAATTAATGGACGATTATATTTCATATATCTGGTCAGTAATATTCCACTGGGCTCTTTTCAGGATGCTTTCTAACACTAACTGCGTT CTTGAAAAAGAGGAGAGGAAAAAATGTATGCATTAAACAATCATCAATAGAAAGCATGCAATCATTGACTCTTTTCACTTGATACTTTTATAAAAAGTGT GCATCTATGCAATCATTCTAAAATAAAGCATGCATGAGTGATGTATTAATTATGTATAAAACTGCATACTCTTCAAATAAATTAGTCTATTTTTTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_135730; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_452180
| Blastp | GPN-loop GTPase 1 from Dictyostelium with 62.41% of identity |
|---|---|
| Blastx | GPN-loop GTPase 1 from Dictyostelium with 62.41% of identity |
| Eggnog | GPN-loop GTPase 1(ENOG410XNRC) |
| Kegg | Link to kegg annotations (DDB_G0293220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463276.1) |
| Pfam | Elongation factor Tu GTP binding domain (PF00009.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |