Ll_transcript_452211

• Id Trinity: TRINITY_DN43238_c0_g1_i3
• Name Transcript: Ll_transcript_452211
• Sequence: GGGCAAAGGAAGAGTTCTTTCGCAGTCGCACTTGCTGAATCCCAACGAAGAAGACACAACATCTTCGCTCTCTTCAACGACGCCGTTTTATCCTTCCCTT CTTCTTATCCTCTCACTTCATTCTCCGTTTTCTTTATTCTTTTCAAAACGCGTTATTCTCTCATTAACGCTATTGTCGTTTTACTTCAAACTAGGGTTTC GCAATTTTCTATTCATTCTCACTCACTCCACTTTTCACTTACTACCTGGATGTGGAAATTGACATAGGGGAAGAGATATTTTGGGTTTTGGTTTAGTTGT TTAACATTATGATGGCGAAAAGTAGGCTCTCTGGAGGTTACTATGGGAATGCAATTGAGACAGGTGGTGAATCAGAAGGGTCGGGTACCTCGGGAAGAGA AGACACTGAAATTACAGTTTCGGAGGAGGAATCGTGTGTCCCGGTGAGGAAGAAGAGTATTAGTTTGAATTCGAGTCGCAGTGATGATGTTTTTAATGTT CCAATGCAAGTTATTCCCTTGTCAAATATGCCATCCTTTAAAAGAAAAGATCTGGTACGTAGGTTAAGATCAGAACTCGAACGGGTTCGGCTATTTCAGA AGAAAGCTGAACTACAAAAAACAAGTGGTGTTACATTGTCATCTTGTAGTGATATTCTTAGCTGTAGCAATGGGCAAAATGGGACTCGAATAGAGCACTC GAGAAAACCACCGGTTTCTGGATCTGTACCAAGCGATAAGTTGAAATCATTAGATCAGAAAGCTCGTGTGCTGAATCGGGGATCTTCTGGAAAGTTTCAG TCTGCGCCACCAACTTCTTCAACAAGCACTGCAAACACTCTGCTGATGAAGGATTGTGATTCATTGTTGAAACGATTGATGGGTCACCAGTATGCTTGGG TTTTCAACACCCCTGTAGATGTTGTGAAGTTGAATCTTCCGGATTATTTCAGTGTTATTAAGCATCCTATGGATTTGGGAACAGTAAAAAGCAAGTTAGC AAGGGGAGCATACTCAAGCCCGTTGGATTTTGCTAGTGATGTGAGGCTTACATTTTCGAATGCAAAGACATATAATCCCTCTGGGAATGATGTCCATTTA ATGGCTGATACACTTGATAAATATTTCGAAGTGAGATGGAAGACAATTGATAAGAAACTGCCAAAAAGTGATGCTCTACCATTGCCCCCGAAGTCAGCCA ATTGTGGAAATGTGAAAACTGCTAGGCCAATGCCTCCTTCAAAAAAGAGGAAAGTTACCTCATTGCCCCCTCAACCTGAAGTAGTGCCACCTGCTAAGAA GGTCATGTCAGATGAAGATAAGCTCAAACTAGGCAGAGAATTGGAGTCTTTGCTTGGAGAAGTGCCCGTCCATATCATTGAATTCTTAAAAGAACATAGT TCAAATGGAAGAGAATGTGGAGAAGATGAAATTGAGATTGATATTGATGATCTCACTGATGATACACTATTTGCATTACGCAAGCTTTTGGATGACTACT TGCAAGACAAGCAAAAGAACAAAGCAAAAGTTGAAGCGTGTGAAATAGAGCTTGTGAATGATTCTGGACCAAGCAATTCCTCATTGCAAGCATTTAAAGG TAATGATCCAGCTGATGAAGAGGTGGACATTGGTGGAAATGAGCCCCCTGTCTCGAGTTATCCTCCTGTGGAGATTGAAAAGGATAAAACTGACAGAAGG AACAACTGTCCTAGTCCAGACAGCTCCTGTGATACAGACTCAACTAGTTCTTCGGATAGTGATTCTGATGATGTTAAAGCAAGTCCTGCAAATGTGGCAA AGGTACCAGAAAATCTGGGTTTTGGAGTTCAGTTGGATGAGAAGACAAGGGCTCCTAATACTCTTGAAAGAAATCAATCTATTAATGGCTTAGATCAACA CGAAGGCACTCAGCCAATGCGAAGTTCTGTTGATCAAGATGGGGATAGTGGTACAATTGAGAGACAGGTTTCCCCTGATAAACTTTATCGAGCTGCCTTA TTGAAAAGTCGATTTGCTGATACTATCTTGAAAGCTCGAGAAAAGACACTCACACAGGGTGAGAAAGGAGATCCGGAGAAATTGCGCCGGGAAAGGGCAA AGCTGGAGATGGAGCAAAAAAAAGAGAGGGCAAGGCTTCAAGCAGAAATACAGGCTGCTGAAGATGCTCGTAAGCGAGCTGCTGCAGAAGCTGCTTTAGA AGCCAGACGAAAGAGGGAGCTCGAGAGAGAAGCTGCACGACAAGCATTGCTTCAGATGGAGAAGACTGTTGAAATCAATGAGAATTCTAGATTCCTGGAA GATTTGGAAAAGCTTAGAGCTGTACCGGGTGAGCAATTACCAAGCTCCGTAGATGAGACAAGTCCTGATCACTCTCAGGATGGCCTTGGTAGTTTCAAGT TTGGGGGTAGTAATCCGTTGGAGCAACTTGGATTATATATTAAAGCTGATGATGAAGAGGAGGAAGGAGAGCCAGCCTGTGTTCCGCATCCCGTAAATGA TGTAGAAGAGGGAGAGATTGATTAAGTATTGCACATTTTGGACAGTGAATCAAACAAAAGTATAATTATCTTGATCCCAAGAAAATTCCCTCAGTATATA GTTCTCATAATCTACTAATGAATGACTAATCCAATACAATTGAGAAGGATCATATTTTCTTGTGCAGGTTTCAGTCTCTACAAGGACTATTTAGTATTTT TGGCTGTTTTCACAACCGACGAGACGAGCGGTTAGAACAGAAACCAAGTTACTAGTGCTGCCTTGAGCAAGCTTAGAAATACTTGGTGCTTGTATTTTAT GTTGGCTTTGAAACTCTGGACATTGAAGTACCCTTATCTGTCCAAATACTTTGTGCTTATATTTGTGTTATACTATTTGTTTTAGCTGTTAAAATTTTGG TAAATTTGAAGTAAGTTTAATGGTTGGGGGTTGATGGAGTTATTATATTGATGTAAGTTGGCAAAATACAGAATTATGGAATCAGAATTAATGACAATAT GTTGCTCAATTTCAGAATTTTCTGTTTAATTACTAGTCATTACTTTGTTGGTAATGTCTAAGAGATATAAATGCTCAAATATTAGCATGTTTTCAATTTT GTGACAGTTTTGATTTAAGTATGTAAGCTGTTGTGTATAAATTGAAGGTTACCATGGAACAGGG
• Tissue: pods
• Gene name: LI_gene_135738;
• Additional information: details;

Expression of Ll_transcript_452211

FPKM

• PAB: 4.2
• PNAB: 9.7
• PS1: 10.1
• PS2: 7.8
• PS3: 10.6
• PW1: 8.6
• PW2: 9.7
• PW3: 7.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_452211

• Blastp: Transcription factor GTE8 from Arabidopsis with 50.94% of identity
• Blastx: Transcription factor GTE8 from Arabidopsis with 50.13% of identity
• Eggnog: bromodomain(COG5076)
• Kegg: Link to kegg annotations (AT3G27260)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019458136.1)
• Pfam: Bromodomain (PF00439.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;