Ll_transcript_452401

• Id Trinity: TRINITY_DN43266_c0_g1_i2
• Name Transcript: Ll_transcript_452401
• Sequence: ATTTGAACCTTTATCTGCCTTATAACCACTGAGACCGACGAGTTATTATTATCCAATGCGTTTGACTGAGAATCTATAAACGTCCTCACAGAAAACCAAA GCCTTAAATCATTTTTAGTCTTTCTGTTAGTTACTCTTCTTATTCTTCCCCTTCCTTCTTCACCTCTCCGTTTCCATGGCAGTTGAACCTCCTCACGTTA ACCTCTTCCACCCTCACTCGCTCACCACCACTAACAACATAGAAATAGATATAGATGATGGTGCTATGGCTCTTCCTTCAACAATGCCTTATTCAACCTA CCACCACCACCATATTCATGTTCTTCCAAGGAAACGTTCCAGACTCGATTCCATAACGGAATCAAACGTTATTCCATTCTCTCAGAAAAAGTTTTCCTCT CAAACTCAACCTCCTTCCTTTCTCGATAATCGACAATCCGAGATCGATCGCTTCATTGCTCTTCACGTAAGCAATTCTCCATCAGTTTCTGTTTCAATAC GTTGTTTCCTTTAAATCGCGGTTTCAGGTACCGTTATGATCTCTTGTATAATCATAGTGACGAATAATGAGCAAGAGAATATAACCGTCGTTATAGTTAA ACTATGCTACAGATTTATCATAATTATGAGAAATTAGAAGAAAAAATTATATAACTGTTTTAAATTGTTGATTATGGCGGTTAATCTAAAATTACGACAA TTACTATAGCAATTTGATTATGAAGATTAACAAAGCTGTAATACCGGAACTAAATGCGATCCACATATTATTCCATAACTGTTATCATTTAAAAATTGAA GTCAATTTCTGTTTTGCTGAAAATTCAGACAGAGAAAGTGAGGATGGAGTTAGAAGAACAGAGTATGAGGCAATCAAGAAAGTTACTAAGCGTGATTCAG TATACAGTAGAGAAGAAACTGATGGAGAAAGATGAAGAAATAGATAGAATAACGAAACTGAATTGGATGCTACAAGAAAAAGTGAAGAGTATATGTGCTG AGAATCAAATTTGGAGAGAGTTAGCACACACTAACAAGGTCACTGCTATTTCGCTGCGTACCAATTTAGAACAGGTACTGGCTGCGCAAATTAGCAGAGA CTGTCATGATAATGACGATGATGATAATGCGGAATCGAGTTGCGGGAGTAATTGTGGTGGTGGTAGTGGTGGTGATGTGGTGGTAGGAAGGATGTGTAAG ATTTGTGGGGTGAGAGAATCTATAGTACTGTTATTACCGTGTAGGCATTTGTGTCTTTGCACAATGTGTGGGTCTAATACCCGGAATTGCCCTCTATGTT ACTCTGGGATCAATGCTAGTGTTCATGTTAATTTCGATTAGGTGTTTTTGAATTTTACATATTAATACTTTTCTTTGTTTCTTTAGTCCGAAGGACAGTG TAAGAAATGAAAAATAGATTTTAGAATTCTGTTAATACAGATTATTTGTTCTCTCTAAAAA
• Tissue: pods
• Gene name: LI_gene_135771;
• Additional information: details;

Expression of Ll_transcript_452401

FPKM

• PAB: 2.8
• PNAB: 2.6
• PS1: 0.9
• PS2: 3
• PS3: 0.3
• PW1: 4
• PW2: 7.6
• PW3: 19

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_452401

• Blastp: BOI-related E3 ubiquitin-protein ligase 1 from Arabidopsis with 53.85% of identity
• Blastx: E3 ubiquitin-protein ligase BOI from Arabidopsis with 53.63% of identity
• Eggnog: protein binding zinc ion binding(ENOG4111S1X)
• Kegg: Link to kegg annotations (AT5G45100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422753.1)
• Pfam: Zinc finger, C3HC4 type (RING finger) (PF13920.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;