| Id Trinity | TRINITY_DN43303_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_527606 |
| Sequence | CGAGGACACAACTCATATATATTCAAGTTCTCAAGAACAACGTCTTCGTCCTTCAACTACCTAAAGCTACTTTGCAAGAAACAGAAGAGAATTGCTTGAC TTAGTGTTGTTCTGTGAATTTTGCAACAATGGAACTCAAGCGTCTCAGAAGGATTCTTGCTAGGAGGAATTCTGCTGCAAAAGCGAGGGAAATGAAAATT CGTTATGAGAAATTTCGTTATGAAAAAGAGTTGAAGGCTAGGGTGAAGAAGCTTCAGTCTATGACTGCTGACATTGATGAAAAGCTTGCCGAGTGTAAAA GAAGAACTGCAGAAAGAGCTGCTTTCAATAACAGGCTGAGAATGCTAATACAGGCTATGAGACAAGATTTGGAGCCTAAAATAGAATTACGTCAGGCAAT ATGGGAAGAACTTCAACAACTCAAGGCACAAAATGTCCTTTTGGCCCTTGAGAGTGGCAACCATGAGGCACTAAACTATATTAACTCTCGATTTTTTCCC CAGCAGCCACTGCTTGGGCTGCCTCCTTCCCCTCCCTCTGATGATGATGAGTCCTTTGATGATGAGTCTTCTGATGATGAGGAGGACTAGCTTGATTTCA ATCAGAAGAACTAGCTCATGATAGTAGCCATAAATGAGTGGTTAGAATAAATGTGACCCGTGAAAGGTTGTGGACACAGTTGAAGACAAGGGGCTAGAAG CTGTTGGATCATGTTGTCAATTGCTTGAGGAACTGCATGTTTCCCCCTCAGATTACTAGCGACACAGGTTTATTCATTTATTCCATTTCCATATATTAAT CGGGATGGGTTCTGGGTGGGTGAGGCAGGGTATCGCATGTACCAAACCCGAACACAATGATAGCGAGTTTAACCCGTTAAATCTAGGTTGAGTTCGGACG GGTATCCACGAGTTCGGTTTTTATTGCTATACCTAGATGTCAGCCATATGATTCAAGCAAATCAAATGAAATGGCGGAGTGCTCCTGATGTCATGTGATA AAAAAGACAACTCAAGCTTAAGGGGAAGTTTTATCACACGACTATAAGACCTGCAATTATGAAACTCACCTTTGGCTTCAAGGGAGTGTATTACAGGAAA TTGAAGCCTTTGGCTTCAATTATGGAAAGTCTGTTGTAAAGCCAGTTGTGTTGTCTGGCTGAGGCTTCTAGTTGTTAGAGTTAGCTTTTTCAATTAGTTA GCGCCAGCCTTGCAACTCGCCACGGAAGCTAGTGATCAGGACTAATGTCTATAAATAGAGATACCCTGTCATTGCATGGTTGAGCTTTCCATAATAAGAA AACTGTCATGGATTCCGTTACACCTTCTCTGCTCAGTTTATTGTTCTTACAGAACAAAATGGCCAAATTAATGCATACATGGTGTGTTTGTGTCTGATTG AAACTTATGATTTGTATGAGATACAAAGTTGGTAATAAGTTTTTCAGGATATGACATTAAGAAGGGTTGGTCAATGAACCTAATTGTTGTTTCTATACAC CATGATCCAGAAGTTTTCCCAGATCCTGTAAAGTATGACCTCTCTGGATTTGATAAACTCATAAGGTCTTTCAGCTTTCTTGGATTTGGTACGGGACCAC GTGTGTCCGGAATGAACCTTGCCAAGATTGAAATGTGTCTTCATACAACATCTTGTCCCCAGATACAAGATGTGAAAAAGATTACTAATAATGGATAACT AGAATACTAAATTTGAAAAATGAAAGTTTTATAGGTTTTGCTGCACAGATAACACTTCTCTTGTTTCTGCTTTGTTCTCTTTTTTATTCACTTTCCATGT TTTAACTCAATTATACCATTGTGTGATAAAAATTAATGTCACCAGTGGAAACCTCTCTGACAAGGAAAGTTCTGTTCAACCAGCACTTGTAAGGATGCCA AAGAACAAGTAGTTCCTCCAGGAATTATAAGCGAACATTTCAAGGCAAAATAGCAAAGCAAAATCATCAAGAATGTTTGTTATATCTGGAACAATATTGC AGTTATTTGTAGCTTAAGTTAATCCAGTATAAGTTGATCACTATGGTTAAGTTGGCTATGATTTAGTTTTATTTTATAGTCAGTTACATCTCAATATTTC AAGCTGGACTATATATGTAATCATTCATTGCTAATTCAATGACATGCTCAATTTCAAAAGTTCATTCTCATAATAATATGGTTTCAGAAAAATATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_135830; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_527606
| Blastp | Transcription factor VIP1 from Arabidopsis with 34.13% of identity |
|---|---|
| Blastx | Cytochrome P450 88A1 from Zea with 44.12% of identity |
| Eggnog | Transcription factor(ENOG410YA2S) |
| Kegg | Link to kegg annotations (AT1G43700) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449766.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |