Ll_transcript_527448

Id TrinityTRINITY_DN43310_c0_g1_i2
Name TranscriptLl_transcript_527448
SequenceGGCTAGGTAAGTAGGTATTATTCATTTGTTTCATAATCAATAAAAAATATCTATCTCATCACTATCCCCTACAAAAATACCATTTCCATAAAGATAAGGT CTTTAACAATTTCTATCTCCTCTTCAGAACCAAACCATCTCCAACAATGGCTGCTCCTCTGTCCACCACAATATCTATCGACCCCAGCACCAGAACACGC TTTACCATTGTCACCCCTCTCACCTTCACACACAGAAATTTTTCCATACACTGCACCGCTTCTGAATCCATTCCACAAACTCCTCCTACATCAACCACTT CAAACACCAAGAATAAGAAGAACAACAACAAAAATTCTTCTCTTTTCGACCAACTCTCACCCCTTGCAAACACCACCTTGTCTAACACAACATCAAAAGA TCAATCATATGTCTTATCCAAACCAAAATCCACATGGGTCAACCCCACCAAACAAAAACGTTCTGTCCTTTCACAGCAGAGGCACAAACGTGTTCCTTAC TCCTATAGTCCACAGCTCAGAGATTTCAAACTCTTTGCACAAAAGCTCAATGATTCTGGTGACTCTGAAGCTGAGTTTTTGGCTTGTCTTGGAGAAATCC CACATGAGCTTACAAGAGAAAATGCACTCTTGATACTCAATAGTTTGAAGACATGGCAAAAAACACTACTTTTTTTCAATTGGATTAGGACCCAGAATTC GCTTCCTATGGAAACCATATTCTACAATGTCACGATGAAGGCTTTGAGGTTTGGGAGACAGTTTGGGAAGATTGAAGAACTTGCACACCAGATGATTGAT GAAGGGACTCAACCAGATAACATTACTTACTCAACAATCATAACTTGTGCTAAGAAGTGTAATCTTTTTGACAAGGCTGTGCAGTGGTTTGAGAGGATGT ACAAGACTGGTTTAATGCCAGATGAGGTCACTTACTCAGCTATCTTGGATGTTTATGCTAAGCTAGGTAAAGTTGAAGAGGTCATAAATTTGTATGAGAA AGCTAGAGCAACTGGGTGGAAACCTGACAATATCACATTCTCTGTGTTGGGGAAGATGTTTGGGGAGGCCGGGGACTATGATGGTATTAGGTATGTATTG CAAGAGATGAAGTCTATTGGGGTGCAGGCTAATTTAGTTGTGTATAATACCTTGTTGGAGGCAATGGGGAAAGCTGGGAAGCCAGGGTTTGCAAGGAGTT TGTTTGAAGAAATGATTGATTTGGGGATAAGCCCGGATGAGAAGACTTTAACGGCACTTATTAAGATATATGGTAAGGCCCGGTGGTCTCGCGATGCACT AGAATTGTGGGACCGAATGAAGGAAAATCGCTGGCCTATGGATTTTTTTCTGTATAATACATTGTTGAATATGTGCGCAGATGTTGGGTTGGTGGAGGAG GCTGAAACTTTGTTCAGGGATATGAAACAGTCTGAGCATCGCAAGCCAGACAGCTGGAGTTACACAGCAATGCTTAACATATATGGCAGTGAAGGAAATG TAGACAAGGCGATGAAATTGTTTGAAGAGATGTCTAAGTCTGGGGTTGAACTCAACATCATGGGGTGTACTTGTTTGATTCAATGCTTGGGAAAAGCTAT GGAGTTTGACGGCGTGGTAAGAGTTTTTAACGTTGCAGTTGAGAGAGGAGTTAAGCTAGATGATAGGCTATGTGGTTGCTTGCTATCTGTTGTGTCTTTG TCTCATGGCAGCAAGCATGAGGAAAACATTCTTGCTTGTTTACAGCAGGCTAACCCAAAATTGGTTGCTTTTATTCAACTGATTGTGGATGAGGAAACTA GTTTTGAGACCATCAAAGAAGAGTTCAAGAATATCATGAGCAGTGCTGCAGTTGAAGTTAGAAGACCCTTCTGTAATTGCTTAATTGACATATGTAGAAA CAAAGAACTCCAAGAGAGAGCCCACGAGCTTCTGTACTTGGGAACCTTGTATGGGTTGTACCCAAGTTTACACAACAAAACTGCCAATGAATGGCGTTTA GATGTTCGATCATTGTCAGTTGGTGCAGCTGAAACTGCATTAGAAGAGTGGATGTGGACACTCACCAAAATTGTTCGGCGGGAGGGGACATTGCCAGAGT TATTCCTAGCCCAAACTGGTAGCGGTACTCATAAGTTTGCCCAAGGACTGAACATTTCTTTTGCCTCTTATTTGAGGAAACTAGATGCTCCATTTAGGCA GAGTGAGGAAAAAGTTGGTAGTTTTATTGCAACTAGAAAGGATTTAGTCTCTTGGGTGCAATCGAAGTTTCCATCAGGTGCTATTGCAACATAGATGGTG GAAAAAGTTCTAGCGGCATTCACCTTCATCCATATGGCTAATACATGAAGTGATATATTCAACTATTTCGAGGTTGAAGCTAGAGATGGCATGTAATCTT CCTCTCATTTTTTAGAATGTCAACACATTCTAAAATTTAGTATTCCTCGTTTCTTCTTTTTTTGTCTAGCACCTTACAAGTTTGGATAGAAGACTGAGGG AGTGCTGCTGTGAGTTGATCATTTTATTAAATTCAATGAAGGGTATTCTAGGAAAGATGGATTGTAGATCTCAACTACTTCAGTGCATGGAGTGCAGCTA GCTAAGGCAATTCTGCAAAATCTGAAGGAAGATAAATATAAATGAGTGCACTTGATGAATAACTAGAAAGGGTCATGTGGTGGAGTCATCTTATGTGTTA TTTGGGCTTGTCATTTTCCCTTCTATGATTTGAAACTTATTAGACAGTAAGAAAATGGCAAAGCAGAATATTAATGTCAAAACTGGTTTTCTTTTCTTTT TATTTGGTTTATACCAAGGTTCCCTTGTTGACAGAGCAAAATTAACCTCTTTCATATAGAAATCACCCATTAGTTTTACCTCTACCATCAAAGTTTTATC CATGCTGGTATTCATTTGAAATGCCTAAAATATTAGCATAATGAGTATGTTATTTGAGAA BLAST
Tissuepods
Gene nameLI_gene_135844; 
Additional informationdetails; 

Expression of Ll_transcript_527448

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_527448
BlastpPentatricopeptide repeat-containing protein At5g46580, chloroplastic from Arabidopsis with 63.52% of identity
BlastxPentatricopeptide repeat-containing protein At5g46580, chloroplastic from Arabidopsis with 68.68% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT5G46580)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019445981.1)
PfamPentacotripeptide-repeat region of PRORP (PF17177.3)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;