| Id Trinity | TRINITY_DN43373_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_527804 |
| Sequence | GTTATCGAATAGGGTCTCAAATCTCAATTTCAATGTAAACAACACATTAAAACGTGCATGGCCCTGTTATTCTCTTAACCCATCCATCACTGGAGCTTTG AGCCCAGAAGAAAATAATTGAATCAAATCCTTTCAAACCCATCTCTTAATTTCTCCCCTAACCTTGAATCAGTTGAAGTAACCACCTCTGCTTTGAAAAT CATTCAAATCCTCGATCATCCATGAACCCTAAAACCCAAAAAATTGAATAAGGTTTATAACCCTAAATTCCCCGTTTCTGCATTTCACTAACGTACTGCT TCTCTAGCTCAATTATTTGAGCCTAAGGGTCCTTCATCAGTGTTTTTAGAGAAGGAAGGAAAGGAGCTAATATGCATCTCTTCTTTCATACTAAAAACAA ATCCTGACTCTAGGTTTTGCATAGGGTTCTGAGTTCTATCTTCCGTCTTCTTAACTTCACCTTGTTAACTATGCAAAAAAGCAACATCACGAAAGCCAAA TCAAAACAACTGCGAAGGACGAAAGTAAAAAAGAAGAGGGATCCGGGAGTAGATGTTCAAGTAGCAGAAACCCCATCAGATTTCTCATTTACTATTGCAA AAACTGCAGTTGCTCAGATCTGCCAATCAGTTGGCTATAAACGCTCTGAATATACTGCATTGGAAAGCTTAACTAATGTTGCCACAAAATGTTTACAATC CATTGCAAGTTCAGCTGCCACCTATGCTAACCGTTCCAATCGTACCGATGCCAACCTCTTTGACCTCATCAATGGTATTCATGATCTGTGCTCTATTCAA GGATTTTCTGGTGGTTCGGTGATGCACAAGAGCAACTTGTTGAGCTCTGGAGCTCTGAAGGAGATTGTGGATTTCGTCAACACCTCTAATGAAGTACCAT TTGCCAAACCAATTCAATGTAAAAATGTTTCAGGAAACTCAAATCCAGAAGCAGCCATTGATACTAGCACATTAACAAGAGCTTCTCAAGAACCAAAAGT CCAAGGCTTCCATATACCAAGATGGCTTCCGGATTTTCCGGAGGAATGCTTGTACAAGAATTGTGGCAAGGTTTTGGTTAAGGAGAGGAAATGTGGTGAG AAACTGTGGGAACATTCACTTGATGTTTGCAGTAGTAATGTGGAGGGGAACAGAGATATATTACAGGTCAATGAGATTGATGGGAAAGAAGAAATAGATG GTAAGATGGAGTTGGCAAAGAAAAGAAGCACAGTGAAGTTTAAGATTGGAGAGAAGGAAGAGAAGCAAATTGAAATGGGTGTGAATATGTTAAATGGGGT ATGTAAGGGAAGGAAAAGAGTATCTTGGACTAATAATATAATTGATGAATCTATGTCAAAGGGAAATAATGATGCAAAGAGTGGTGTCAAGAGAAAAAGA GAGGATGGTTTTTATGAAGATTTTAATTGAACATATTTTTAAACTTTTTGAAAGAATTATGTCAAGGTTGGGATTCGAACCCAGAACGTTTCATAGAGTA TTGCATGTAGTAACCAACTGTTTTCAGGCTTAGTTTTGTTTTACTTTTGGTTCGGTTTGATATATACTTGTTATTTAAATTTCAGTTTAACTGAGTCATT GGACCGGTTCCTAGCTTATTCGGTTATTTATTGGATCTCTTAAAATATAGAACTATGATTGGTTAGTACGGACGGAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_135942; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_527804
| Blastp | Transcription initiation factor TFIID subunit 8 from Arabidopsis with 38.12% of identity |
|---|---|
| Blastx | Transcription initiation factor TFIID subunit 8 from Arabidopsis with 38.12% of identity |
| Eggnog | TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor(ENOG410ZS4D) |
| Kegg | Link to kegg annotations (AT4G34340) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433118.1) |
| Pfam | Bromodomain associated (PF07524.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |