Id Trinity | TRINITY_DN43376_c0_g1_i2 |
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Name Transcript | Ll_transcript_527490 |
Sequence | CATGGACCATGTTCAGTTTAGCATTCATTAGTTGTTCACTACTATGGCGCCTTTGAATCCTGATGCTCCAAAATTCATTCCATCAGAACACAAACTCCTT CATCAACCCTTCACTTTATTTTGTTCTCCTCTTTCCACTCCATTCCCTCACCAACACTGTTATTTCCCTTTCTCCTCCCACCAACTACTCTATCACCCTA AGGTCTTTACAAGGGTGGTTCCGTTTTCTTCCATTCCCTTCTATCATCATGGTGATGCTAACATCACCACCAAGCAACCTCTTAGCACTACCACCCAAAC TCAAGCAGAAGAACCTACTGGTCCTTACCTATCTGAACCTGTGATAATCCAAGAAGCAAGCCATGTACATCAAAAGGAGGAGACTAAAGAAGCTCATGGT TTGAAACGACATGCCTCGAAGGGAATGAAGCGTGGTCATCGTGGGTTTAGACACAAGAAGGAAAAAGATGTTGAGTATCAGAAATGTTTGGCTTCAAGGA ACAAACAAAACTGTGGGCGTGGTGATGCATACAAGCATTCAAAGACTTTTCCTATTAAGAAACGATATTATAGTTCTATTACACCTGTTAGGGTTGATGG CGAGGAAACAACTGTGATGATAAGAAATATTCCAAACAAATACACGCGTGACTCGCTCGTTGATTACTTGGAAAAACAGTGCATGTTGGAAAATCACAAA GCTGAAGATAATGAAAGTGGTGGGAGTGTGAAAGATTGCATTGTCTTAGCCTTTGATTTTGTGTATCTCCCTATTGATTTCAAAAGTGGGCTGAACAAGG GCTATGCCTTTGTGAACTTCACAAGCCCCAAGGGTGCTTGGAAGTTCAACATGACAGCCTCTAATATGAAGTGGGATTTGTTCCAGTCCCACAAGATACG TAAAGTTGTAGCCGCACGTCTCCAGGGAAAAGAGGCATTACAGAAGCACTTCGAAAGTATGCACTTTCCATGTGAGTCCGAGGAAGTTTTGCCAATTTGT TTTAACCCACCTCGGGATGGTTTAACCAATGGGAGTGGAGAACAAAGGACAATTGGGAGGCTGGGGCTTTTCAATCCTCGACAAGTTTGAGCTGAAAGTG GCACAGTAGTGACGTGACTAAGCTTCTTTGCTTAGGACCTGGTTTCATTTCTTGTTATTCCGTCGTTTTGGTTTGGTTTAGTTTTTATGTTAGGTTAAGT TTCTTTTCAGCTTCACTGGTGTAAGGTTTTGCTTCATGTGTTCTATTTCACAAATATATAGTTGGGTGGACCTTTGCCACCTGGTCAGTGTGGGCCAGTG AGGTTAGGTGGTGGGCTCCACCTTTCTTGTGGATAGGCACAAGCTGTTACCTTTTGGTGGAAGGGGAAAGGGTTTGGTAAAGTCTTTTCTCTATTGAACT TCTGATATGATGGTGTTTGTTTTCTAGGGAATGACTTTTACATTACCCCTTTGTGTCATTTTTAGTTTCTATTTCTGGTTATGATATCTTTCTGTTTTTG CTGCACTGTTTCAAATATTTTGACACTAATTTGTGATTTATAGCATCGTGGAATGTTGTTGGTCAGCGGCTGTATATAATGGTATATTATATCCCACAAG TCAAAGTTTGCAAGCTTTAATGCTATATGCTGGG BLAST |
Tissue | pods |
Gene name | LI_gene_135945; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_527490
Blastp | Protein terminal ear1 homolog from Oryza sativa with 44.59% of identity |
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Blastx | Protein terminal ear1 homolog from Oryza sativa with 44.59% of identity |
Eggnog | Rna-binding protein(ENOG4111R9F) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019450794.1) |
Pfam | RNA recognition motif 2 (PF04059.11) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |