Id Trinity | TRINITY_DN43404_c0_g2_i1 |
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Name Transcript | Ll_transcript_321530 |
Sequence | AGGAACTGGATCACCAATTCCTCCTATTCGAGGAACTGGATCACCAATTCCTCATGGAACTGGATCTCCAGTTCCTCCTACTCGAGGAACTGGATCACCA ATTCCTCCTATTCGAGGAACTGGATCACCAATTCCTCATGGAACTGGATCTCCAGTTCCTCCTACTCGAGGAACTGGATCACCAATTCCTCATGGAACTG GATCTCCAGTTCCTCCTACTCGAGGAACTGAATCACCAACTCCTCCTACTCGAGGAACTGGATCAACAAATCGTCCTACTCTGATGCGTGATCTCCCTCG TCCACTCCCTCATACAATTCATGCAGATATTGAACGGCTAAACATATCAGAGTCAGATAACAAATGGGAAAAGATTTCACCTGTGCACAGGCCTGACAAT GGTGGAACAATAGCAATTCGGAGAACCAGGCTTCGCGTCAATCATTTTGCCGTTACCTTCAATCCACAAACTATAATTAATCACTACGATGTTGATGTGA AGCCGAAGTTGCCGCCAAGACAAGGTCGACCTCCGAAGAAGATATCGAAATCAGATTTATCTTTGATTAGGGACAAATTGTTTGCTGATCATCCTAAGAC ATTGCCTTTGAAAATGACTGGATATGATGGTGAAAAGAACATAGTGAGTGCAGTTCCACTACCAGAAGAAACCTTTACTGTGGACATCTCTCATGGAGAG GATGAAAAGCCTGTTTCATATGTTGTTAGTTTAACTCTTGTTAACAAGCTTGAGTTTCGAAAGTTACGGGATTACCTTAGTGGCAATGTTCTGTCAATTC CTAGGGATGTTTTATATGGAATGGATTTGGTTGTGAAGGAGAATCCTGCAAATAGCACTGTTTCTTTAGGACGATGCTTCTATCCTACAAACCCTCCATT GGTAGATAATGATCTTGGACATGGCATAATCGCAATTGGAGGGTTTCAACACAGTCTGAGACCTACCTCTCAGGGTTTGGCTATGTGTTTGGACTACTCG GTTTTATCTTTCCGTAAGAAATTGTCTGTCCTGGACTTCCTAGCTGCTCACATTGATGGTTTCAATTTGGCTGGGTTTTGGAAATATAAGAGGCAGGTTG AGGAGGCGCTTATTGGATTGAAAGTCAATGTCACTCACAGGAGAACCAAGCAGAAGTACACTATTGCCAAGTTAACAGATAGGGAGATACAACATATTAC TTTTCCTCTGGTGGACCTAGAGGGTCTAAACCCCCCAACGGATGTTAGTCTTGTTGCATACTTCAAAGATAAATATGGTGTGGTCATTAAGCACAAGGAT ATTCCTGCCTTGCAGTTTGGAGGCAGCAAGATGAATTATGTACCTATGGAGTTGTGTGTCTTAGTTGAAGGTCAAAGGTTCCCGAAAGAATATTTGGACA AGAATGCTTCTAGGACCTTGAAAGATATGTCATTGGCTCGTCCGTGGGATAGGGAAGCTCTCATACAAAGGATGATAAAATCAAGTGATGGACCTTGCGG GTAAGGAGAACATAATTTCATGAGCTATTCAATTTTGGCATTGTATTGTTTCCTTTGCATGATTTTAGTTACTATTGTCTCGAATGATGGTGTTGCATTG TTGGTTGCATATTGATAAATGGTTCTAACTAGGCTTAGTTCCACTTACAGTGTTGGACTGCTTGATAAATGAGTGTTTATTTGCATATTGTAAAATGACA TCAAATGTGAGAATGCTAAATACATTGACATGACTGTTAAACTTCTCATGCATTGCCCTTTCTCTCCTCATTTGTTAACTTTTTTATTAACTGATTGCAG TGCCCTATGTTTGGTGATTGATGAATGAAGATTCTCTTGCTAGATATGTACTTCGAAAATATTATTATTGAATGTTTATTTTCTGGTACTTGTATTACTG ATTTTCTGCTATTCTTTACTACTGTTTGATGGAATATAAAATTGAATATTTTGGCAAGCTTATGTGAAGCTTTCTTTTAACTTGCCTAATTTTCTTGATA TCAATATGGACCATTTCTAATGATTTTGGGTTTTTCTTTCCTTGCTGCTTTGCACTGTCCAAGAAGAGTTTTTTTTCATCTAAAAAAGGTGAAATAAACT AAATGAGTTTTAAAGGACTGTTAACATAGCAGTACATCCTCAAATGTCCATGCATGGTGCACTTCGTCTATCATTATAATTGGCATTTTATCTCTTTCCT GATGGACATTGCATTGGTTCACACTTTTCTTTATTTATTGGAAACAGAGGTGGTATTCTTCAAAACTTTGGAATGAATGTCAACACTACAATGACAAATG TCACTGGACGTGTCATTGGGCCCCCAAAGTTGAAGTTAGGTGATCCAACTGGTAAGATTATTAGTCTGACGGTGGATCCAGAGAAATGTCAGTGGAATTT ACTTGGAAGATCAATGGTGGAAGGGAAGTCAGTTGATTGTTGGGGCATTCTTGATTTTACCAGCCAGGGGCCAAATTGGAACAAATTAAAAGGCGACCAA TTCATTTGGAAGCTTGTCGATAAGTACAGAAAATTGGGCATTAACATGGCAGAGCCAGTTCATGTTGAACATTCTACAATGCGGAAACTTGGGGATTATG GTTCACTGTGTAAGCTACTTGAAAAAATTAATGATGGCGTTTATAAAAAATGTCAGCGCCGGTTGCAATTTCTTCTCTGTGTGATGGCCAACAAAGATCC AGGTTACAAGTGGCTCAAATGGATTTCTGAGACGAAGATTGGCATAGTGACACAATGTTGTTTATCTGGTAATGCTAATGAAGGGAAAGATCAGTATCTT ACTAATATTGCTCTGAAGATCAATGCAAAACTTGGAGGCAGTAATGTAGAGCTTAATAATAGGCTCCCACACTTTGAAGGTGAAGGTCATGTTATGTTTA TTGGGGCTGATGTCAATCATCCTGGTTCCCGGGATGTTGATAGTCCTTCGATTTCTGCAGTGGTTGCCACTGTTAACTGGCCTGCTGCAAATCGCTATGC AGCACGTGTTTGTGCTCAAGTGCATCGGAAGGAGAAAATTATGAACTTCGGAGAAATTTGCTATGAGCTTGTTCAATGCTATTATGGATTGAACAAAGTG AAGCCTGAAAAAATTGTCATCTTTCGTGATGGAGTTAGTGAGAGCCAATTCCATATGGTCCTTACTGAAGAGCTACTGGATTTGAAGAAAGTATTTGAGC GCTCAAATTATTTCCCAACCATCACTCTCATTGTGGCACAAAAGCGACATCAGACTCGATTATTCCCTGCAGGTAGGAACGAAGGGACATCTGGTGGCAA TGTGTACCCTGGAACAGTTGTGGACACAAAAATCATACACCCTTTCGAATTCGATTTTTACCTGTGTAGCCATTTTGGAAGCCTTGGTACAAGCAAGCCC ACTCACTATCATGTCTTGTGGGATGAACACAAGTTTACTTCTGATGGATTGCAGGAACTCATATATAATATGTGCTTCACCTTTGCAAGGTGCACCAAAC CTGTATCTTTAGTTCCTCCTGTGTACTACGCCGACCTTGCTGCGTATAGAGGACGTTTATACCATGAAGCGAAGATTGGGGTGCAATCTCCATATTCTGC TGCATCCTCATCACCCATGGCGACCACAATTTCAAAAGATCTAGATTGTTACAAGTTGCATGCTGATGTGCAAAATGGAATGTTCTTCATCTGAAGGGTG TGCTCTTTGTTTTGCGTCCAAATTTGTGCGTGAATCTAAGACCTTGTGTGTTTGAAACTGTGTCGCCTTATTTTCTTCTATGTTTAGTAATTTCAGTTAG TAAATTGTATTGTCTGAGTCATTTTATTGATCTCAAAGTGAGATTCCATGTCTGTAGTGGTTTGGTTGGGATGGGAATTACCTATTACTATTCTTGAAGA TGGCAAAGTGATTGGATGATAGCTAAAGGGACAATGTTCACAAGCCTATAGCTTGTATTTCTTTTTTTGTCCATTTTGTTCTGTCAGCTAAGTTCATGGG TATCTCTTGGGCAATGTGTCTGCCCCTGTGTTAATTTAAGAAAAAATTAAAAAATTATGGTGAAATGCATTTAAATGCTTCAAAAACTTATGATGTGATT TTTTCTATATAAAATAAAATTTACTTAAAAAAGTTCTTTC BLAST |
Tissue | pods |
Gene name | LI_gene_135997; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_321530
Blastp | Protein argonaute 2 from Arabidopsis with 44.99% of identity |
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Blastx | Protein argonaute 2 from Arabidopsis with 53.25% of identity |
Eggnog | eukaryotic translation initiation factor 2c(ENOG410XP07) |
Kegg | Link to kegg annotations (AT1G31280) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421826.1) |
Pfam | N-terminal domain of argonaute (PF16486.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |